RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 KIAA0895Q8NCT3 520 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 HDAC7Q8WUI4 952 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SCFD1Q8WVM8 642 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF560Q96MR9 790 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM117Q9H0C3 514 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TSPY26PQ9H489 355 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LIMA1Q9UHB6 759 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 DSEQ9UL01 958 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 MKL2Q9ULH7 1088 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SCN5AQ14524 2016 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SRCAPQ6ZRS2 3230 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRIQ4A6NIV6 560 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 C9IYK1 514 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 OIP5O43482 229 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 KRT13P13646 458 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 NPEPPSP55786 919 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 HTRA4P83105 476 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TLE2Q04725 743 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TYRO3Q06418 890 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC26Q2I0M4 334 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CDKAL1Q5VV42 579 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TTI2Q6NXR4 508 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ALKAL1Q6UXT8 129 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 USP49Q70CQ1 688 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CATSPER4Q7RTX7 472 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 RHPN2Q8IUC4 686 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 KIAA1958Q8N8K9 716 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PAWRQ96IZ0 340 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CGRRF1Q99675 332 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LBHD1Q9BQE6 289 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 NUP58Q9BVL2 599 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PDZD7Q9H5P4 517 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 AGPAT3Q9NRZ7 376 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 MAGEC2Q9UBF1 373 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LCMT1Q9UIC8 334 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CPSF3Q9UKF6 684 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 UBQLN1Q9UMX0 589 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 COQ4Q9Y3A0 265 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF233A6NK53 670 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ATXN7O15265 892 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CLDN3O15551 220 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM189A1O60320 539 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CHRNA1P02708 482 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 P4HA1P13674 534 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LAG3P18627 525 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 THPOP40225 353 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 NLRP11P59045 1033 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SMAD3P84022 425 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 MAN2A1Q16706 1144 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ZSCAN23Q3MJ62 389 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 FILIP1LQ4L180 1135 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM47CQ5HY64 1035 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ARMCX5Q6P1M9 558 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 RUFY4Q6ZNE9 571 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM50Q86XT4 487 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SYCP3Q8IZU3 236 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC43Q8N309 656 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 METTL13Q8N6R0 699 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC15Q8TF66 581 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 C2orf15Q8WU43 125 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 DNAJB3Q8WWF6 145 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SNX27Q96L92 541 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 HINFPQ9BQA5 517 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 COMMD8Q9NX08 183 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 AGO2Q9UKV8 859 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PCDHA11Q9Y5I1 949 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PTPRDP23468 1912 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 MTCL1Q9Y4B5 1905 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 A0A087WZ62 844 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 C5orf67F2Z3F1 127 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 HNRNPDLO14979 420 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 GFPT2O94808 682 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 NR3C1P04150 777 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 SSBP05455 408 aaKnown RBP eCLIP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 RAG1P15918 1043 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 TBXAS1P24557 533 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 MARK3P27448 753 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 GPC1P35052 558 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 CLCN3P51790 818 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 PNOCQ13519 176 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 BMS1Q14692 1282 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF618Q5T7W0 954 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 ELMSAN1Q6PJG2 1045 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC55Q6ZSA7 311 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 ECHDC2Q86YB7 292 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 DRC7Q8IY82 874 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM86AQ8N2M4 240 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 CCDC150Q8NCX0 1101 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 BEST2Q8NFU1 509 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 NELFBQ8WX92 580 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 BSNDQ8WZ55 320 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF689Q96CS4 500 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 ACAP3Q96P50 834 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 FDXACB1Q9BRP7 624 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 IFIH1Q9BYX4 1025 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 RPF1Q9H9Y2 349 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 CYP3A43Q9HB55 503 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 RC3H2Q9HBD1 1191 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM8AQ9HCN3 771 aa3.56□□□□□ -1.84
SCAMP1-201ENST00000320280 PLCB1Q9NQ66 1216 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms