RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FEM1BQ9UK73 627 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 TMEM150BA6NC51 233 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 CALCAP01258 141 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 CHRM1P11229 460 aaPredicted RBP20.28■□□□□ 0.84
RTN4-201ENST00000317610 TMED2Q15363 201 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 SLC39A4Q6P5W5 647 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 RHOT1Q8IXI2 618 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 KIRREL3Q8IZU9 778 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 SH2D3AQ9BRG2 576 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 HEMGNQ9BXL5 484 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 OSBPL8Q9BZF1 889 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 MYLK2Q9H1R3 596 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 PCDHB2Q9Y5E7 798 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 ATP2A2P16615 1042 aaKnown RBP20.27■□□□□ 0.84
RTN4-201ENST00000317610 NPTX2P47972 431 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 GHRHRQ02643 423 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 MOGSQ13724 837 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 CCDC142Q17RM4 750 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 CPA5Q8WXQ8 436 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 CFAP57Q96MR6 1250 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 RBM15Q96T37 977 aaKnown RBP eCLIP20.27■□□□□ 0.844e-8■■■■■ 30.1
RTN4-201ENST00000317610 ETNK1Q9HBU6 452 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 ANKEF1Q9NU02 776 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 TBC1D22BQ9NU19 505 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 PAX7P23759 505 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 AOC3Q16853 763 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 FAM102BQ5T8I3 360 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 PCNX4Q63HM2 1172 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 C15orf39Q6ZRI6 1047 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 ANKS1BQ7Z6G8 1248 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 EXD1Q8NHP7 514 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 ELMO3Q96BJ8 720 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 USH1CQ9Y6N9 552 aa20.27■□□□□ 0.84
RTN4-201ENST00000317610 NFASCO94856 1347 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 TAS2R40P59535 323 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 TBC1D10BQ4KMP7 808 aaPredicted RBP20.26■□□□□ 0.83
RTN4-201ENST00000317610 TMEM237Q96Q45 408 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 TRIM6Q9C030 488 aaPredicted RBP20.26■□□□□ 0.83
RTN4-201ENST00000317610 FBXO28Q9NVF7 368 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 DENND3A2RUS2 1198 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 TOM1O60784 492 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 ICAM1P05362 532 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 PTGER2P43116 358 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 NSFP46459 744 aaKnown RBP20.26■□□□□ 0.83
RTN4-201ENST00000317610 BPIFB4P59827 614 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 PSMC5P62195 406 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 MRPS9P82933 396 aaKnown RBP20.26■□□□□ 0.83
RTN4-201ENST00000317610 SETDB1Q15047 1291 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 LLGL2Q6P1M3 1020 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 FAM47EQ6ZV65 393 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 PRUNE1Q86TP1 453 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 AGGF1Q8N302 714 aaeCLIP20.26■□□□□ 0.83
RTN4-201ENST00000317610 SPIRE2Q8WWL2 714 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 TTC25Q96NG3 672 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 NTPCRQ9BSD7 190 aaKnown RBP20.26■□□□□ 0.83
RTN4-201ENST00000317610 PI4K2AQ9BTU6 479 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 KIFC3Q9BVG8 833 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 CHKBQ9Y259 395 aa20.26■□□□□ 0.83
RTN4-201ENST00000317610 LIN7AO14910 233 aaPredicted RBP20.25■□□□□ 0.83
RTN4-201ENST00000317610 ADCY1Q08828 1119 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 DMP1Q13316 513 aaPredicted RBP20.25■□□□□ 0.83
RTN4-201ENST00000317610 SPARCL1Q14515 664 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 P3H1Q32P28 736 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 ANKRD20A2Q5SQ80 823 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 ANKRD20A1Q5TYW2 823 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 ANKRD20A3Q5VUR7 823 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 MIS18BP1Q6P0N0 1132 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.25■□□□□ 0.83
RTN4-201ENST00000317610 CLEC4DQ8WXI8 215 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 INPP5DQ92835 1189 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 AGBL1Q96MI9 1066 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 PHTF1Q9UMS5 762 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 SMG5Q9UPR3 1016 aaKnown RBP20.25■□□□□ 0.83
RTN4-201ENST00000317610 EXOC1LA0A1B0GW35 172 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 GSTTP1A0A1W2PQM5 241 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 MTMR1Q13613 665 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 PDK4Q16654 411 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 XKR9Q5GH70 373 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 SPDYAQ5MJ70 313 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 DAB2IPQ5VWQ8 1189 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 CYP4F22Q6NT55 531 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 DRICH1Q6PGQ1 229 aaPredicted RBP20.25■□□□□ 0.83
RTN4-201ENST00000317610 PHLDB2Q86SQ0 1253 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 GPD1LQ8N335 351 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 ERP27Q96DN0 273 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 KIAA1586Q9HCI6 787 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 SENP1Q9P0U3 644 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 CCPG1Q9ULG6 757 aa20.25■□□□□ 0.83
RTN4-201ENST00000317610 DNALI1O14645 258 aaPredicted RBP20.24■□□□□ 0.83
RTN4-201ENST00000317610 ECM2O94769 699 aaPredicted RBP20.24■□□□□ 0.83
RTN4-201ENST00000317610 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 PLA2G4FQ68DD2 849 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 GJD4Q96KN9 370 aaPredicted RBP20.24■□□□□ 0.83
RTN4-201ENST00000317610 FAM118BQ9BPY3 351 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 SAYSD1Q9NPB0 183 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 NFIBO00712 420 aa20.24■□□□□ 0.83
RTN4-201ENST00000317610 EDF1O60869 148 aaKnown RBP20.24■□□□□ 0.83
RTN4-201ENST00000317610 JAK3P52333 1124 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms