RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PCDHB8Q9UN66 801 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ZNF318Q5VUA4 2279 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 MYO10Q9HD67 2058 aa19.31■□□□□ 0.68
TPM1-203ENST00000317516 ADRB2P07550 413 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 GAP43P17677 238 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 NTHL1P78549 312 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 POSTNQ15063 836 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 ADALQ6DHV7 355 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 MTSS1LQ765P7 747 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 BEST2Q8NFU1 509 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 FGF13Q92913 245 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 SNX21Q969T3 373 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 HVCN1Q96D96 273 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 USP28Q96RU2 1077 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 CYP4F11Q9HBI6 524 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 CPSF3Q9UKF6 684 aaKnown RBP19.3■□□□□ 0.68
TPM1-203ENST00000317516 EXOC7Q9UPT5 735 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 PIEZO1Q92508 2521 aa19.3■□□□□ 0.68
TPM1-203ENST00000317516 ARHGEF37A1IGU5 675 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 WDR27A2RRH5 827 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 STK25O00506 426 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 FAM189A1O60320 539 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 CFHP08603 1231 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 PTPN2P17706 415 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 RFX1P22670 979 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 STAT6P42226 847 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 POU5F1Q01860 360 aaKnown RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 YWHAHQ04917 246 aaPredicted RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 TCF15Q12870 199 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 HTR4Q13639 388 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 STK38Q15208 465 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 ZC2HC1CQ53FD0 456 aaPredicted RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 DSTYKQ6XUX3 929 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 USP37Q86T82 979 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 SFR1Q86XK3 245 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 TCEAL8Q8IYN2 117 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 SIX5Q8N196 739 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 ZNF396Q96N95 335 aaPredicted RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 RTP3Q9BQQ7 232 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 ASB7Q9H672 318 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 MRPL44Q9H9J2 332 aaKnown RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 DNMT3BQ9UBC3 853 aaKnown RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 DERAQ9Y315 318 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 MRPS23Q9Y3D9 190 aaKnown RBP19.29■□□□□ 0.68
TPM1-203ENST00000317516 STYXL1Q9Y6J8 313 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 NUMBLQ9Y6R0 609 aa19.29■□□□□ 0.68
TPM1-203ENST00000317516 MYMKA6NI61 221 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 M0QZQ0 153 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 GALR2O43603 387 aaPredicted RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 OAZ2O95190 189 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 HSP90AA1P07900 732 aaKnown RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 MRE11P49959 708 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 ZBTB41Q5SVQ8 909 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 SPATA1Q5VX52 437 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 SLC39A4Q6P5W5 647 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 ELMOD1Q8N336 334 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 TMEM105Q8N8V8 129 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 AVENQ9NQS1 362 aaPredicted RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 AFF4Q9UHB7 1163 aaKnown RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 AGO2Q9UKV8 859 aaKnown RBP19.28■□□□□ 0.68
TPM1-203ENST00000317516 PCDHB13Q9Y5F0 798 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 PLXNA3P51805 1871 aa19.28■□□□□ 0.68
TPM1-203ENST00000317516 ANKRD63C9JTQ0 380 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 ZNF197O14709 1029 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 RHOP08100 348 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 IDEP14735 1019 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 CPB1P15086 417 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.68
TPM1-203ENST00000317516 ACOT2P49753 483 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 TMEM132DQ14C87 1099 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 JADE1Q6IE81 842 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 IQCEQ6IPM2 695 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 HSCBQ8IWL3 235 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 ITFG1Q8TB96 612 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 ATOH1Q92858 354 aaPredicted RBP19.27■□□□□ 0.68
TPM1-203ENST00000317516 ACCSQ96QU6 501 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 LRRC27Q9C0I9 530 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 HCFC1R1Q9NWW0 138 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 GDE1Q9NZC3 331 aa19.27■□□□□ 0.68
TPM1-203ENST00000317516 OR6C75A6NL08 312 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 AOC1P19801 751 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.67
TPM1-203ENST00000317516 ADCY1Q08828 1119 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 ALCAMQ13740 583 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 CYP4A22Q5TCH4 519 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 PARM1Q6UWI2 310 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 DNAJC19Q96DA6 116 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 ZNF512Q96ME7 567 aaPredicted RBP19.26■□□□□ 0.67
TPM1-203ENST00000317516 SLC2A4RGQ9NR83 387 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 C2CD2Q9Y426 696 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 DENND4AQ7Z401 1863 aa19.26■□□□□ 0.67
TPM1-203ENST00000317516 SPTLC2O15270 562 aa19.25■□□□□ 0.67
TPM1-203ENST00000317516 PPP6R2O75170 966 aa19.25■□□□□ 0.67
TPM1-203ENST00000317516 GCNT3O95395 438 aa19.25■□□□□ 0.67
TPM1-203ENST00000317516 NPR3P17342 541 aa19.25■□□□□ 0.67
TPM1-203ENST00000317516 TYMPP19971 482 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms