RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 FBXO2Q9UK22 296 aaPredicted RBP16.95■□□□□ 0.3
FOXR1-201ENST00000317011 CPSF3Q9UKF6 684 aaKnown RBP16.95■□□□□ 0.3
FOXR1-201ENST00000317011 PCDHB8Q9UN66 801 aa16.95■□□□□ 0.3
FOXR1-201ENST00000317011 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
FOXR1-201ENST00000317011 NOTCH4Q99466 2003 aa16.95■□□□□ 0.3
FOXR1-201ENST00000317011 DMDP11532 3685 aa16.95■□□□□ 0.3
FOXR1-201ENST00000317011 MYO15AQ9UKN7 3530 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 MICAL2O94851 1124 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 FAM13AO94988 1023 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 SEC24AO95486 1093 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 CFHP08603 1231 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 POU5F1Q01860 360 aaKnown RBP16.94■□□□□ 0.3
FOXR1-201ENST00000317011 DHX8Q14562 1220 aaKnown RBP16.94■□□□□ 0.3
FOXR1-201ENST00000317011 ZBTB41Q5SVQ8 909 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 MAP4K3Q8IVH8 894 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 CD302Q8IX05 232 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 CCDC105Q8IYK2 499 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 TMEM130Q8N3G9 435 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 APPL2Q8NEU8 664 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 FLCNQ8NFG4 579 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 GPR152Q8TDT2 470 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
FOXR1-201ENST00000317011 FBXL21Q9UKT6 434 aa16.94■□□□□ 0.3
FOXR1-201ENST00000317011 UBQLN1Q9UMX0 589 aaKnown RBP16.94■□□□□ 0.3
FOXR1-201ENST00000317011 RHOP08100 348 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 PTPN2P17706 415 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
FOXR1-201ENST00000317011 NBL1P41271 181 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 LIG4P49917 911 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 STARD6P59095 220 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 GPC5P78333 572 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 PABPC1LQ4VXU2 614 aaKnown RBP16.93■□□□□ 0.3
FOXR1-201ENST00000317011 PRSS36Q5K4E3 855 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 NPAS3Q8IXF0 933 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 OXCT2Q9BYC2 517 aaPredicted RBP16.93■□□□□ 0.3
FOXR1-201ENST00000317011 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 DLGAP2Q9P1A6 1054 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
FOXR1-201ENST00000317011 POLIQ9UNA4 740 aa16.93■□□□□ 0.3
FOXR1-201ENST00000317011 ZFHX2Q9C0A1 2572 aaPredicted RBP16.92■□□□□ 0.3
FOXR1-201ENST00000317011 VPS37CA5D8V6 355 aaPredicted RBP16.92■□□□□ 0.3
FOXR1-201ENST00000317011 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 PPP1R37O75864 691 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 PAX3P23760 479 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 MARCKSP29966 332 aaPredicted RBP16.92■□□□□ 0.3
FOXR1-201ENST00000317011 ELF1P32519 619 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 SPAG1Q07617 926 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 SLC39A14Q15043 492 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 SLC5A9Q2M3M2 681 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 CTXN3Q4LDR2 81 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 FAM173BQ6P4H8 233 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 MTSS1LQ765P7 747 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 DTWD2Q8NBA8 298 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 DNAJC19Q96DA6 116 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 BICD1Q96G01 975 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
FOXR1-201ENST00000317011 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 FAM86C1Q9NVL1 165 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 STK17AQ9UEE5 414 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 MTMR6Q9Y217 621 aa16.92■□□□□ 0.3
FOXR1-201ENST00000317011 CITO14578 2027 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 ANO9A1A5B4 782 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 K7ENM7 598 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 PIRO00625 290 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 VNN2O95498 520 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 TYMPP19971 482 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 MCM4P33991 863 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 LILRA4P59901 499 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 PPP2R3AQ06190 1150 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 SLFN12LQ6IEE8 588 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 ZNF280DQ6N043 979 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 ST13P5Q8NFI4 369 aaPredicted RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 DDX23Q9BUQ8 820 aaKnown RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 ASB7Q9H672 318 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 CYP4F11Q9HBI6 524 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 DERAQ9Y315 318 aa16.91■□□□□ 0.3
FOXR1-201ENST00000317011 MRPS23Q9Y3D9 190 aaKnown RBP16.91■□□□□ 0.3
FOXR1-201ENST00000317011 MYMKA6NI61 221 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
FOXR1-201ENST00000317011 ECI2O75521 394 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 HSP90AA1P07900 732 aaKnown RBP16.9■□□□□ 0.3
FOXR1-201ENST00000317011 ADSSP30520 456 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
FOXR1-201ENST00000317011 EPHA5P54756 1037 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 CRELD2Q6UXH1 353 aaPredicted RBP16.9■□□□□ 0.3
FOXR1-201ENST00000317011 RNF19BQ6ZMZ0 732 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 MSTO1Q9BUK6 570 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 TBC1D17Q9HA65 648 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 ARHGEF3Q9NR81 526 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 CEP72Q9P209 647 aa16.9■□□□□ 0.3
FOXR1-201ENST00000317011 SEL1LQ9UBV2 794 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms