RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 KIAA1586Q9HCI6 787 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 NOCTQ9UK39 431 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TJP1Q07157 1748 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GAKO14976 1311 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ARHGEF35A5YM69 484 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPAG7O75391 227 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GH1P01241 217 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GM2AP17900 193 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GEMIN4P57678 1058 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SESN3P58005 492 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ERFEQ4G0M1 354 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 EPC2Q52LR7 807 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ATG16L1Q676U5 607 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 KLC3Q6P597 504 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 C1orf186Q6ZWK4 172 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 BRINP3Q76B58 766 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 KATNAL2Q8IYT4 538 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TMC2Q8TDI7 906 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MANSC1Q9H8J5 431 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC4CQ9HCJ2 640 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 KCNK4Q9NYG8 393 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TAS2R1Q9NYW7 299 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 COQ4Q9Y3A0 265 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 BTBD19C9JJ37 291 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MT-ND3P03897 115 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DLATP10515 647 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RARBP10826 455 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GTF2H1P32780 548 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RFC4P35249 363 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 HOXD13P35453 343 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 VAMP7P51809 220 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DSG1Q02413 1049 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TNIP1Q15025 636 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 PALB2Q86YC2 1186 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RBM12BQ8IXT5 1001 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SETDB2Q96T68 719 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ZMYM2Q9UBW7 1377 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA31A5Q5VU36 1347 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA31A6Q5VVP1 1343 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 EMSYQ7Z589 1322 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA31A7Q8IWB4 1347 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 EDIL3O43854 480 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ATP9BO43861 1147 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MYL4P12829 197 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SFSWAPQ12872 951 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DBN1Q16643 649 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DSTYKQ6XUX3 929 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ZWILCHQ9H900 591 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CHST7Q9NS84 486 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ZDHHC7Q9NXF8 308 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TAS2R14Q9NYV8 317 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ANAPC7Q9UJX3 599 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF148Q9UQR1 794 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DDX60Q8IY21 1712 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 NPHP3-ACAD11A0A0J9YXS1 232 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L15C9J2P7 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L13C9JLJ4 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L11C9JVI0 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L18D6R9N7 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L22D6RA61 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L17D6RBQ6 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L19D6RCP7 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L20D6RJB6 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPECC1L-ADORA2AF8WAN1 911 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TBX10O75333 385 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 KRT37O76014 449 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MCCD1P59942 119 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 DEUP1Q05D60 604 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L24Q0WX57 530 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SNX1Q13596 522 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L6PQ6QN14 398 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RNF168Q8IYW5 571 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 PPM1KQ8N3J5 372 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 KLHL23Q8NBE8 558 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 LMO3Q8TAP4 145 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RAB3IL1Q8TBN0 382 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SLC20A1Q8WUM9 679 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TEKT1Q969V4 418 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 BTBD9Q96Q07 612 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TSSK1BQ9BXA7 367 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RAB20Q9NX57 234 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ITGB1BP2Q9UKP3 347 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ANKRD63C9JTQ0 380 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TYROBPO43914 113 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CCDC166P0CW27 439 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 IMPDH2P12268 514 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ABCD1P33897 745 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CHKAP35790 457 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ECE1P42892 770 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 GABPAQ06546 454 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CLEC16AQ2KHT3 1053 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CBWD6Q4V339 395 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CBWD3Q5JTY5 395 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CBWD5Q5RIA9 395 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TMCO4Q5TGY1 634 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RNF220Q5VTB9 566 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 FBXL13Q8NEE6 735 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SUPT20HQ8NEM7 779 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms