RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 USP20Q9Y2K6 914 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 BTBD19C9JJ37 291 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 PODXLO00592 558 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 SOCS7O14512 581 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 RARGP13631 454 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 PLS3P13797 630 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 MSH2P43246 934 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 GRIK3Q13003 919 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 HAUS6Q7Z4H7 955 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 GBP7Q8N8V2 638 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 MMP19Q99542 508 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 SEL1LQ9UBV2 794 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 CCL15-CCL14A0A0B4J2E2 113 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 KCTD2Q14681 263 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 CLUL1Q15846 466 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 CCL15Q16663 113 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 ARHGEF2Q92974 986 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 PCDHA3Q9Y5H8 950 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 GBP1P32455 592 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 ARHGAP44Q17R89 818 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 CAPRIN2Q6IMN6 1127 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 SPATA21Q7Z572 469 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 CCDC105Q8IYK2 499 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 FITM2Q8N6M3 262 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 GDAP1Q8TB36 358 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 ATP6V0A1Q93050 837 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 SYT11Q9BT88 431 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 KCNK9Q9NPC2 374 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 ARHGEF3Q9NR81 526 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 PDGFCQ9NRA1 345 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 NFASCO94856 1347 aa18.3■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD62A6NC57 917 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 STAM2O75886 525 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 ACSL3O95573 720 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 SUPT20HL2P0C7V6 817 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 EDNRBP24530 442 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 MFSD5Q6N075 450 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 UBL4BQ8N7F7 174 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 ARMC2Q8NEN0 867 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 COPS5Q92905 334 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 CBWD1Q9BRT8 395 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 GPR88Q9GZN0 384 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKEF1Q9NU02 776 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 LOC285556D6RIA3 1793 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 FOXO6A8MYZ6 492 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 SMNDC1O75940 238 aaKnown RBP eCLIP18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 CTNNA2P26232 953 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 LACTBP83111 547 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 MIS18BP1Q6P0N0 1132 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 ADAM22Q9P0K1 906 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 CHORDC1Q9UHD1 332 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 ARL2BPQ9Y2Y0 163 aa18.29■□□□□ 0.52
SCAMP4-201ENST00000316097 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 TCRBV7S2A1N4TA0A589 114 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 LRRN2O75325 713 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 GGPS1O95749 300 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 SLC25A27O95847 323 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 TRIM49P0CI25 452 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 TRIM49CP0CI26 452 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 HSPA6P17066 643 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 NPTX2P47972 431 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 KCNJ1P48048 391 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD20A2Q5SQ80 823 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD20A1Q5TYW2 823 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD20A3Q5VUR7 823 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 VSTM1Q6UX27 236 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 RUNDC3BQ96NL0 473 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 PCYT2Q99447 389 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 KIF9Q9HAQ2 790 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 XPNPEP1Q9NQW7 623 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 CYP26B1Q9NR63 512 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ICAM3P32942 547 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 FMO5P49326 533 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 ATP11AP98196 1134 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 HSDL1Q3SXM5 330 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 TRIM50Q86XT4 487 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 KCNV2Q8TDN2 545 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 BORCS6Q96GS4 357 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 RMDN2Q96LZ7 410 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 CDC42EP4Q9H3Q1 356 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 RXFP1Q9HBX9 757 aa18.28■□□□□ 0.52
SCAMP4-201ENST00000316097 CTNNAL1Q9UBT7 734 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms