RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NPHS2Q9NP85 383 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 XPO7Q9UIA9 1087 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 TBX20Q9UMR3 447 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 C19orf81C9J6K1 198 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 PPP1R12AO14974 1030 aaPredicted RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 RBP5P82980 135 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 STILQ15468 1287 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 EZH2Q15910 746 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 TKFCQ3LXA3 575 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TNIP3Q96KP6 325 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 BEGAINQ9BUH8 593 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 KIFC3Q9BVG8 833 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TRIM15Q9C019 465 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 H3BQF6 201 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 ZBTB7AO95365 584 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 RALAP11233 206 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 RFC5P40937 340 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 RGS7P49802 495 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 RPS6P62753 249 aaKnown RBP14.5□□□□□ -0.09
SPAST-201ENST00000315285 KIAA0895Q8NCT3 520 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 ARL8AQ96BM9 186 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 POLLQ9UGP5 575 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 SNX9Q9Y5X1 595 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 MDM1Q8TC05 714 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 ERP27Q96DN0 273 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 MAGEB5Q9BZ81 275 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 FBXO28Q9NVF7 368 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 CCT8L1PA6NM43 557 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 PGM1P36871 562 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 PHEXP78562 749 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 ACAD10Q6JQN1 1059 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 XRRA1Q6P2D8 792 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 IL17RAQ96F46 866 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 OSBPL1AQ9BXW6 950 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
SPAST-201ENST00000315285 MRPL46Q9H2W6 279 aaKnown RBP14.5□□□□□ -0.09
SPAST-201ENST00000315285 KIF9Q9HAQ2 790 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 ZBTB22O15209 634 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 TEX2Q8IWB9 1127 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 FEZF2Q8TBJ5 459 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 RAPGEF5Q92565 580 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 TARS2Q9BW92 718 aaKnown RBP14.5□□□□□ -0.09
SPAST-201ENST00000315285 FAM129AQ9BZQ8 928 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 NIF3L1Q9GZT8 377 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 CHMP2BQ9UQN3 213 aa14.5□□□□□ -0.09
SPAST-201ENST00000315285 CST8O60676 142 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 AKAP3O75969 853 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 ZNF200P98182 395 aaPredicted RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 RFX8Q6ZV50 586 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 RBM46Q8TBY0 533 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 YIPF3Q9GZM5 350 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 SIK2Q9H0K1 926 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 RANBP17Q9H2T7 1088 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 IL17RBQ9NRM6 502 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 ATP9BO43861 1147 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 APOEP02649 317 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 GTF2H1P32780 548 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 ZNF571Q7Z3V5 609 aaPredicted RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 AGGF1Q8N302 714 aaeCLIP14.49□□□□□ -0.09
SPAST-201ENST00000315285 ACTRT1Q8TDG2 376 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 TAAR1Q96RJ0 339 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 C17orf75Q9HAS0 396 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 MGEA5O60502 916 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 PPFIA2O75334 1257 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 WEE2P0C1S8 567 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 PPARGP37231 505 aaPredicted RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 TMEM132DQ14C87 1099 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 RIBC1Q8N443 379 aaPredicted RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 RDM1Q8NG50 284 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 SPATA18Q8TC71 538 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 SLC26A7Q8TE54 656 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 CCDC124Q96CT7 223 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 EIF4E1BA6NMX2 242 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 RBP3P10745 1247 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 KDSRQ06136 332 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 C3orf62Q6ZUJ4 267 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 IFT43Q96FT9 208 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 SMARCAD1Q9H4L7 1026 aa14.49□□□□□ -0.09
SPAST-201ENST00000315285 MRPL40Q9NQ50 206 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 CNOT7Q9UIV1 285 aaKnown RBP14.49□□□□□ -0.09
SPAST-201ENST00000315285 SGPL1O95470 568 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 COL23A1Q86Y22 540 aaPredicted RBP14.48□□□□□ -0.09
SPAST-201ENST00000315285 CBWD2Q8IUF1 395 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 MUTP22033 750 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 MEI1Q5TIA1 1274 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 RNF168Q8IYW5 571 aaPredicted RBP14.48□□□□□ -0.09
SPAST-201ENST00000315285 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 ADA2Q9NZK5 511 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 PTK7Q13308 1070 aa14.48□□□□□ -0.09
SPAST-201ENST00000315285 FASTKD1Q53R41 847 aaKnown RBP14.48□□□□□ -0.09
SPAST-201ENST00000315285 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms