RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 LRRC36Q1X8D7 754 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNED1-201ENST00000310397 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 KRT35Q92764 455 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 NARFQ9UHQ1 456 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 FAM205CA6NFA0 338 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 FAM84BQ96KN1 310 aaPredicted RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 DACH2Q96NX9 599 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 TMEM8AQ9HCN3 771 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 NSMCE4AQ9NXX6 385 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 ZNF212Q9UDV6 495 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 SNX19Q92543 992 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 CHCHD3Q9NX63 227 aaKnown RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 MTMR4Q9NYA4 1195 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 PTPRMP28827 1452 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 ZNF543Q08ER8 600 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 DSTYKQ6XUX3 929 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 THEM5Q8N1Q8 247 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 DDI1Q8WTU0 396 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 RXFP1Q9HBX9 757 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 ZBTB24O43167 697 aaPredicted RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 TRPC1P48995 793 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 STILQ15468 1287 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 VPS33BQ9H267 617 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 ARHGEF28Q8N1W1 1705 aaKnown RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 RPA1P27694 616 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 CTCFP49711 727 aaPredicted RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 DNAJC3Q13217 504 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 ADRM1Q16186 407 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 TSPAN17Q96FV3 270 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 FRMD8P1Q9BZ68 369 aaPredicted RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 A0A0A6YYK5 440 aaPredicted RBP13.82□□□□□ -0.2
SNED1-201ENST00000310397 E5RI56 91 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 ATICP31939 592 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
SNED1-201ENST00000310397 SLIT1O75093 1534 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 SUGP1Q8IWZ8 645 aaKnown RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 RSAD1Q9HA92 442 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 SLC9A1P19634 815 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 KIAA2013Q8IYS2 634 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 FBXL16Q8N461 479 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 MDM1Q8TC05 714 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 PSTPIP1O43586 416 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 TARSP26639 723 aaKnown RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 CES2O00748 559 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 DGAT1O75907 488 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 ENO3P13929 434 aaPredicted RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 COPAP53621 1224 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 POLD4Q9HCU8 107 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 FNDC3AQ9Y2H6 1198 aaKnown RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 ADCY3O60266 1144 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 DAB2P98082 770 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 C10orf88Q9H8K7 445 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
SNED1-201ENST00000310397 STRNO43815 780 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 OR6P1Q8NGX9 317 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 ANKZF1Q9H8Y5 726 aa13.81□□□□□ -0.2
SNED1-201ENST00000310397 A0A087X0T9 212 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 FAM228BP0C875 321 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 HSD17B4P51659 736 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 DDIASQ8IXT1 998 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 DAGLBQ8NCG7 672 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CDC26Q8NHZ8 85 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 SLC8A2Q9UPR5 921 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 APOA4P06727 396 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 LAMB3Q13751 1172 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 SLC10A5Q5PT55 438 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CPA5Q8WXQ8 436 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 SATB2Q9UPW6 733 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CDYLQ9Y232 598 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MYL2P10916 166 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 SWSAP1Q6NVH7 229 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 TMA16Q96EY4 203 aaKnown RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 AKAP10O43572 662 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 DAB1O75553 588 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms