RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TBC1D7Q9P0N9 293 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 PIN4Q9Y237 131 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 TNFSF13BQ9Y275 285 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 ATP8A1Q9Y2Q0 1164 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PCDHB13Q9Y5F0 798 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PCDHGB7Q9Y5F8 929 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 SLC4A7Q9Y6M7 1214 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 CHD9Q3L8U1 2897 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 SMTNL1A8MU46 457 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 ABLIM1O14639 778 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 EOMESO95936 686 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 AMHP03971 560 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 SKIP12755 728 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 PROZP22891 400 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 KCNJ6P48051 423 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 DEFB103AP81534 67 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 STRN3Q13033 797 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 COBLL1Q53SF7 1204 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 SLC27A1Q6PCB7 646 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 MMS22LQ6ZRQ5 1243 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
CHD6-201ENST00000309279 MAP4K3Q8IVH8 894 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 ZNF507Q8TCN5 953 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 GPT2Q8TD30 523 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
CHD6-201ENST00000309279 BHMTQ93088 406 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 HPS3Q969F9 1004 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 SYAP1Q96A49 352 aaPredicted RBP8.92□□□□□ -0.98
CHD6-201ENST00000309279 CPB2Q96IY4 423 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 PDZD7Q9H5P4 517 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 FAM105AQ9NUU6 356 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 TRMT1Q9NXH9 659 aaKnown RBP8.92□□□□□ -0.98
CHD6-201ENST00000309279 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
CHD6-201ENST00000309279 USP20Q9Y2K6 914 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 PCDHA5Q9Y5H7 936 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 CHD7Q9P2D1 2997 aa8.92□□□□□ -0.98
CHD6-201ENST00000309279 ZBBXA8MT70 800 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 H0Y3Z8 333 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 N4BP3O15049 544 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 EIF3DO15371 548 aaKnown RBP eCLIP8.91□□□□□ -0.983e-6■■□□□ 11.9
CHD6-201ENST00000309279 TOM1L1O75674 476 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 GJB5O95377 273 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 GCNT3O95395 438 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 TPM3P06753 285 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MYBP10242 640 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 ATP2A2P16615 1042 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 IL4RP24394 825 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 HOXD13P35453 343 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 HALP42357 657 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 RAB27AP51159 221 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 COPAP53621 1224 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 STK4Q13043 487 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 BMT2Q1RMZ1 405 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 LRIT3Q3SXY7 679 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 ATF7IP2Q5U623 682 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 AGAP9Q5VTM2 703 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 TWF2Q6IBS0 349 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 LVRNQ6Q4G3 990 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 STXBP4Q6ZWJ1 553 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MRPL10Q7Z7H8 261 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 ECHDC2Q86YB7 292 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 KIAA0895Q8NCT3 520 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 GLIS3Q8NEA6 775 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MNS1Q8NEH6 495 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 UHMK1Q8TAS1 419 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 SCFD1Q8WVM8 642 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 TARS2Q9BW92 718 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 SLC39A2Q9NP94 309 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 EXOC1Q9NV70 894 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 TMEM161AQ9NX61 479 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 SNTG2Q9NY99 539 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MKL2Q9ULH7 1088 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 PCDHB2Q9Y5E7 798 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 STYXL1Q9Y6J8 313 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 FNDC1Q4ZHG4 1894 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 ESYT3A0FGR9 886 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 DGKIO75912 1065 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 SMC2O95347 1197 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MBD3O95983 291 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 ATF7P17544 494 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 TNFAIP3P21580 790 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 ST13P50502 369 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 HTRA4P83105 476 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 PTPN14Q15678 1187 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 EEF1DP3Q658K8 133 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 SLC39A4Q6P5W5 647 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 CCBE1Q6UXH8 406 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 CDR2LQ86X02 465 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 HERC6Q8IVU3 1022 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 MYOCDQ8IZQ8 938 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 SMG8Q8ND04 991 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 ERCC4Q92889 916 aaPredicted RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 ZNF689Q96CS4 500 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms