RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 PCMTD2Q9NV79 361 aa19.54■□□□□ 0.72
UBXN2A-201ENST00000309033 CCDC22O60826 627 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 ITIH2P19823 946 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 BRD2P25440 801 aaKnown RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 RPA1P27694 616 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 BYSLQ13895 437 aaKnown RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 GPAT2Q6NUI2 795 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 CDR2LQ86X02 465 aaPredicted RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 SH3KBP1Q96B97 665 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 ARHGEF26Q96DR7 871 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 YIPF3Q9GZM5 350 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 EEF2KO00418 725 aaKnown RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 GH1P01241 217 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 KLRC1P26715 233 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 RUSC1Q9BVN2 902 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 EIF3DO15371 548 aaKnown RBP eCLIP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 C6orf222P0C671 652 aaPredicted RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 PIGHQ14442 188 aaPredicted RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 VPS72Q15906 364 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 SEZ6Q53EL9 994 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 KLF6Q99612 283 aaPredicted RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 A0A1W2PQJ5 194 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 CARSP49589 748 aaKnown RBP19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 PCSK7Q16549 785 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 RFWD2Q8NHY2 731 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 RUBCNQ92622 972 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 PBXIP1Q96AQ6 731 aa19.53■□□□□ 0.72
UBXN2A-201ENST00000309033 ELMO2Q96JJ3 720 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 GFAPP14136 432 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 NOA1Q8NC60 698 aaKnown RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 ATG4CQ96DT6 458 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 OSBPL1AQ9BXW6 950 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 MYOZ2Q9NPC6 264 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 METTL5Q9NRN9 209 aaKnown RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 SYF2O95926 243 aaKnown RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 THEMIS2Q5TEJ8 643 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 GRAMD1AQ96CP6 724 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 WWP1Q9H0M0 922 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 MRPL40Q9NQ50 206 aaKnown RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 NLRP11P59045 1033 aaKnown RBP19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 ATPAF2Q8N5M1 289 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 PTPRUQ92729 1446 aa19.52■□□□□ 0.72
UBXN2A-201ENST00000309033 GPR75-ASB3A0A0A6YYF3 556 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 MSH4O15457 936 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 TMCC1O94876 653 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 PGM1P36871 562 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 GOLGA7BQ2TAP0 167 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 TSSK1BQ9BXA7 367 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 EML4Q9HC35 981 aaKnown RBP19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 ALG6Q9Y672 507 aa19.52■□□□□ 0.71
UBXN2A-201ENST00000309033 HNRNPCL2B2RXH8 293 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 EXTL3O43909 919 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 HNRNPCL1O60812 293 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 HOXD10P28358 340 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 KCNJ6P48051 423 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 VEPH1Q14D04 833 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 WDR35Q9P2L0 1181 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PPRC1Q5VV67 1664 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 TADA2AO75478 443 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 CYP2B6P20813 491 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ITGA8P53708 1063 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ICA1LQ8NDH6 482 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PABPC5Q96DU9 382 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 IRF1P10914 325 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 GMPSP49915 693 aaPredicted RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 LRIG3Q6UXM1 1119 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 RBM46Q8TBY0 533 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ASAP3Q8TDY4 903 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 TRIM62Q9BVG3 475 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 OSBPL8Q9BZF1 889 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 TMEM253P0C7T8 217 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 TAF1CQ15572 869 aaPredicted RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PPP4R4Q6NUP7 873 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PSMC3IPQ9P2W1 217 aaPredicted RBP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 AURKCQ9UQB9 309 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ARL2BPQ9Y2Y0 163 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 RSPH10B2B2RC85 870 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 PRPF4O43172 522 aaKnown RBP eCLIP19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 RSPH10BP0C881 870 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 RFC5P40937 340 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 ENGASEQ8NFI3 743 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 SLC7A14Q8TBB6 771 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 CCT8L2Q96SF2 557 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 KLC4Q9NSK0 619 aa19.51■□□□□ 0.71
UBXN2A-201ENST00000309033 GRB10Q13322 594 aa19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 SLC25A41Q8N5S1 370 aa19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 MED15Q96RN5 788 aa19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 TLR2O60603 784 aa19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 UPP2O95045 317 aa19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 VCPP55072 806 aaKnown RBP19.5■□□□□ 0.71
UBXN2A-201ENST00000309033 KYNUQ16719 465 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms