RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SLMAPQ14BN4 828 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 Q4G0T1 1027 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 CYP4A22Q5TCH4 519 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ATF7IP2Q5U623 682 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 CENPUQ71F23 418 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 DACH2Q96NX9 599 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 NFKBIL1Q9UBC1 381 aaPredicted RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 ANGPTL2Q9UKU9 493 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 KNTC1P50748 2209 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 A0A1W2PQC6 194 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 LRRD1A4D1F6 860 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTEFA5A3E0 1075 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTECB2RU33 542 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ZC3H11AO75152 810 aaKnown RBP eCLIP8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTEIP0CG38 1075 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 CLCN1P35523 988 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 DDR1Q08345 913 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 NBPF9Q3BBW0 867 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTEGQ6S5H5 508 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 SLAIN1Q8ND83 568 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 MSRAQ9UJ68 235 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 LRRN2O75325 713 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 FAM173BQ6P4H8 233 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 C4orf22Q6V702 233 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ADAT2Q7Z6V5 191 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 MFN1Q8IWA4 741 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 EGFL8Q99944 293 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 TRPM3Q9HCF6 1732 aaPredicted RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 POTEMA6NI47 508 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 CCDC188H7C350 402 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 PGRMC1O00264 195 aaKnown RBP8.77□□□□□ -1
PCDHB1-201ENST00000306549 LRG1P02750 347 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 MAP4P27816 1152 aaKnown RBP8.77□□□□□ -1
PCDHB1-201ENST00000306549 ATICP31939 592 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 ACTR2P61160 394 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 PKN2Q16513 984 aaKnown RBP8.77□□□□□ -1
PCDHB1-201ENST00000306549 FSCBQ5H9T9 825 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 TMEM199Q8N511 208 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 EXT2Q93063 718 aa8.77□□□□□ -1
PCDHB1-201ENST00000306549 NRCAMQ92823 1304 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 NMT2O60551 498 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 HADHAP40939 763 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC1A1P43005 524 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DYNLT1P63172 113 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 ACAD11Q709F0 780 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DDX53Q86TM3 631 aaKnown RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DPF3Q92784 378 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 ASCC2Q9H1I8 757 aaPredicted RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 RIOX1Q9H6W3 641 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 ECT2Q9H8V3 914 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 MED4Q9NPJ6 270 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 MRGBPQ9NV56 204 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 C4BP0C0L5 1744 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 A0A1B0GW55 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 ARHGEF9O43307 516 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 URODP06132 367 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L2P0CJ85 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L3P0CJ86 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L4P0CJ87 422 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L5P0CJ88 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L6P0CJ89 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4L7P0CJ90 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT4P19013 534 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 NCF2P19878 526 aaPredicted RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM213AQ9BRX8 229 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 TRIM4Q9C037 500 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DUX4Q9UBX2 424 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 DBR1Q9UK59 544 aaKnown RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 UBQLN1Q9UMX0 589 aaKnown RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 URB1O60287 2271 aaKnown RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 CNTNAP5Q8WYK1 1306 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT37O76014 449 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 GNA15P30679 374 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 CRLF3Q8IUI8 442 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 SYNDIG1LA6NDD5 238 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 LGALS16A8MUM7 142 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 CLIC2O15247 247 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 HSPA4LO95757 839 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 OSTNP61366 133 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 HINFPQ9BQA5 517 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 ZWILCHQ9H900 591 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 PXMP2Q9NR77 195 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 G3BP2Q9UN86 482 aaKnown RBP8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC45A1Q9Y2W3 748 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 PPM1AP35813 382 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 THPOP40225 353 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 LHX1P48742 406 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT72Q14CN4 511 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 OOSP2Q86WS3 158 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 CCDC197Q8NCU1 140 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 APBA2Q99767 749 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 SPATA16Q9BXB7 569 aa8.77□□□□□ -1.01
PCDHB1-201ENST00000306549 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms