RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 OLFML2BQ68BL8 750 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 PPIL6Q8IXY8 311 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 HAO1Q9UJM8 370 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 HSPA13P48723 471 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 NLRP9Q7RTR0 991 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 NAF1Q96HR8 494 aaKnown RBP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 HIC2Q96JB3 615 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 ARHGAP20Q9P2F6 1191 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 CEP152O94986 1710 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 AP3B1O00203 1094 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 DEAF1O75398 565 aaPredicted RBP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 PON1P27169 355 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 SETD3Q86TU7 594 aaPredicted RBP13.5□□□□□ -0.25
COL3A1-201ENST00000304636 PAK5Q9P286 719 aa13.5□□□□□ -0.25
COL3A1-201ENST00000304636 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 ENO3P13929 434 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SKOR1P84550 965 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 PID1Q7Z2X4 250 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 MCEEQ96PE7 176 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 TMEM8AQ9HCN3 771 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 DSTYKQ6XUX3 929 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 RXFP1Q9HBX9 757 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 C16orf96A6NNT2 1141 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 ESRRBO95718 433 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 ST3GAL1Q11201 340 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 BEST2Q8NFU1 509 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 KLF6Q99612 283 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SUGT1Q9Y2Z0 365 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 HUS1O60921 280 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 CIITAP33076 1130 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 SESN2P58004 480 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 GRB10Q13322 594 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 LMBRD2Q68DH5 695 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 GJB7Q6PEY0 223 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 RBBP8NLQ8NC74 664 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 FRMD8Q9BZ67 464 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 CNOT7Q9UIV1 285 aaKnown RBP13.49□□□□□ -0.25
COL3A1-201ENST00000304636 MYO3BQ8WXR4 1341 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 IQGAP1P46940 1657 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 KIAA1210Q9ULL0 1709 aa13.49□□□□□ -0.25
COL3A1-201ENST00000304636 ANGPT2O15123 496 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 ARHGEF9O43307 516 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 SUPT3HO75486 399 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 FSBPO95073 299 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 RALAP11233 206 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 PDIA6Q15084 440 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 C16orf86Q6ZW13 317 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 SULF1Q8IWU6 871 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
COL3A1-201ENST00000304636 PGBD4Q96DM1 585 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 TMA16Q96EY4 203 aaKnown RBP13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CES2O00748 559 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 UBOX5O94941 541 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 APOA1P02647 267 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 EFNA5P52803 228 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CDC26Q8NHZ8 85 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CCT7Q99832 543 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 HEY2Q9UBP5 337 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 F8VZ95 297 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 AKAP10O43572 662 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 RAD17O75943 681 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CAPRIN1Q14444 709 aaKnown RBP13.48□□□□□ -0.25
COL3A1-201ENST00000304636 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
COL3A1-201ENST00000304636 IFT43Q96FT9 208 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 ATXN7L3BQ96GX2 97 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 FAM118BQ9BPY3 351 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 PACSIN1Q9BY11 444 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 KIF17Q9P2E2 1029 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 NEMP1O14524 444 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 COPAP53621 1224 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CHI3L2Q15782 390 aa13.48□□□□□ -0.25
COL3A1-201ENST00000304636 CENPPQ6IPU0 288 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms