RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 C1orf54Q8WWF1 131 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 IFT74Q96LB3 600 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SGIP1Q9BQI5 828 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 TEX13BQ9BXU2 312 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ANAPC7Q9UJX3 599 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 R3HDM2Q9Y2K5 976 aaKnown RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 CTDP1Q9Y5B0 961 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 GSTTP1A0A1W2PQM5 241 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SPOPO43791 374 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 IFI35P80217 286 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ADCY2Q08462 1091 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 TRMT10CQ7L0Y3 403 aaKnown RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 MDM1Q8TC05 714 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 C3orf70A6NLC5 250 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 MAFO75444 373 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 TCEA3O75764 348 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ASPAP45381 313 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ACOT2P49753 483 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 LACTB2Q53H82 288 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ANGEL2Q5VTE6 544 aaKnown RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 BICD1Q96G01 975 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 VCPIP1Q96JH7 1222 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 FGD4Q96M96 766 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 XPO6Q96QU8 1125 aaKnown RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 JPH2Q9BR39 696 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 USP2O75604 605 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 POLGP54098 1239 aaPredicted RBP7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SPRED3Q2MJR0 410 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 KCNV1Q6PIU1 500 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 ARFGAP2Q8N6H7 521 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 FAM212AQ96EL1 285 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SEC16BQ96JE7 1060 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 EURLQ9NYK6 297 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 BTBD7Q9P203 1132 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 MTUS1Q9ULD2 1270 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
RGPD3-201ENST00000304514 SOWAHBA6NEL2 793 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CDH5P33151 784 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TNFSF9P41273 254 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 DRP2Q13474 957 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ANKRD20A8PQ5CZ79 823 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PRAMEF18Q5VWM3 479 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TRIM72Q6ZMU5 477 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TRMT1LQ7Z2T5 733 aaKnown RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PIGWQ7Z7B1 504 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 OR5B17Q8NGF7 314 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CDC42EP4Q9H3Q1 356 aaKnown RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PPANQ9NQ55 473 aaKnown RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 RBAKQ9NYW8 714 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 LGR5O75473 907 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TCF4P15884 667 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ITIH2P19823 946 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 STRN3Q13033 797 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 STXBP2Q15833 593 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 KRT71Q3SY84 523 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 GNPTABQ3T906 1256 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 C6orf118Q5T5N4 469 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 WDR49Q8IV35 697 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ATG4AQ8WYN0 398 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PTPRHQ9HD43 1115 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 BCCIPQ9P287 314 aaKnown RBP eCLIP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SOCS7O14512 581 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ASAP2O43150 1006 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PEX10O60683 326 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ERLIN2O94905 339 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 GCAP28676 217 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 GNA15P30679 374 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 KCNJ1P48048 391 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 C1QBPQ07021 282 aaKnown RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SGO2Q562F6 1265 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SMYD5Q6GMV2 418 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 HIBCHQ6NVY1 386 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 RIOX2Q8IUF8 465 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CCDC105Q8IYK2 499 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ROPN1BQ9BZX4 212 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 MTFR1LQ9H019 292 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CENPHQ9H3R5 247 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ROPN1Q9HAT0 212 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CETPP11597 493 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 TBXAS1P24557 533 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 HIRAP54198 1017 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 GSCP56915 257 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 CNTN2Q02246 1040 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SKIDA1Q1XH10 827 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 PHLDB2Q86SQ0 1253 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 GRK7Q8WTQ7 553 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 MSTO1Q9BUK6 570 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 HOXC10Q9NYD6 342 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 LGALS13Q9UHV8 139 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 LDHAP00338 332 aaKnown RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
RGPD3-201ENST00000304514 ITGA8P53708 1063 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 C2CD6Q53TS8 623 aa7.68□□□□□ -1.18
RGPD3-201ENST00000304514 LBX2Q6XYB7 198 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms