RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TRIM65Q6PJ69 517 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TNIP2Q8NFZ5 429 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 RMDN3Q96TC7 470 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 ROGDIQ9GZN7 287 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 RGS2P41220 211 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 GALNTL6Q49A17 601 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 GATAD2AQ86YP4 633 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 PHACTR4Q8IZ21 702 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 SPATA33Q96N06 139 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 SIK3Q9Y2K2 1263 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 MFN2O95140 757 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 SGSM1Q2NKQ1 1148 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 PMM1Q92871 262 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 KCNA3P22001 575 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CDKL3Q8IVW4 592 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CAAP1Q9H8G2 361 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 RWDD2AQ9UIY3 292 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 USP17L3A6NCW0 530 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 USP17L4A6NCW7 530 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NCF1BA6NI72 391 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NCF1CA8MVU1 366 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 TPST1O60507 370 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NCF1P14598 390 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 TALDO1P37837 337 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 RHAGQ02094 409 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CYP51A1Q16850 503 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 USP17L1Q7RTZ2 530 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NDST4Q9H3R1 872 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 C10orf88Q9H8K7 445 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 TRIM3O75382 744 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 DDI1Q8WTU0 396 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 SHCBP1LQ9BZQ2 653 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 ANAPC2Q9UJX6 822 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CTSHP09668 335 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 ADORA1P30542 326 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 PPP2R2AP63151 447 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 UBASH3BQ8TF42 649 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CCDC3Q9BQI4 270 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 PHACTR1Q9C0D0 580 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 ZNF302Q9NR11 478 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 CFAP99D6REC4 459 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 RGS4P49798 205 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 TTC23Q5W5X9 447 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 R3HCC1LQ7Z5L2 792 aaKnown RBP14.89□□□□□ -0.03
HIPK3-201ENST00000303296 VPS37AQ8NEZ2 397 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 IP6K1Q92551 441 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 SNF8Q96H20 258 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 PHLPP2Q6ZVD8 1323 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 RGS7P49802 495 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 KCNK10P57789 538 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 C16orf89Q6UX73 402 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 KANSL2Q9H9L4 492 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 PCMTD2Q9NV79 361 aa14.89□□□□□ -0.03
HIPK3-201ENST00000303296 HLA-DQA2P01906 255 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 USP17L8P0C7I0 530 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 AVPR1AP37288 418 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 NME5P56597 212 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ZNF57Q68EA5 555 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ZNF786Q8N393 782 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 DYNLL2Q96FJ2 89 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 CNOT7Q9UIV1 285 aaKnown RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 PIN4Q9Y237 131 aaKnown RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 SLC9A8Q9Y2E8 581 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 TNRQ92752 1358 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 C3orf70A6NLC5 250 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 KLC1Q07866 573 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ARMC4Q5T2S8 1044 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 FLAD1Q8NFF5 587 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 MRPL48Q96GC5 212 aaKnown RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 UVRAGQ9P2Y5 699 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 KRT16P08779 473 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 PDGFRBP09619 1106 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 GIMAP8Q8ND71 665 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 SPIRE2Q8WWL2 714 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 OSGEPL1Q9H4B0 414 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 VTI1BQ9UEU0 232 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 NCOA1Q15788 1441 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 KIF14Q15058 1648 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 USP19O94966 1318 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 NEURL1BA8MQ27 555 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 TMEM62Q0P6H9 643 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 NR1H3Q13133 447 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 MMRN1Q13201 1228 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 NDUFA5Q16718 116 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 TCEAL5Q5H9L2 206 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 SWSAP1Q6NVH7 229 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 KLHL20Q9Y2M5 609 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 FTLP02792 175 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 GCFC2P16383 781 aaKnown RBP14.88□□□□□ -0.03
HIPK3-201ENST00000303296 POU4F1Q01851 419 aa14.88□□□□□ -0.03
HIPK3-201ENST00000303296 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms