RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PPIL2Q13356 520 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 CUL2Q13617 745 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 NCOA4Q13772 614 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 TMEM132AQ24JP5 1023 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 INO80BQ9C086 356 aaPredicted RBP23.39■■□□□ 1.34
TPM4-201ENST00000300933 BCCIPQ9P287 314 aaKnown RBP eCLIP23.39■■□□□ 1.34
TPM4-201ENST00000300933 FAM107AO95990 144 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 ACO1P21399 889 aaKnown RBP23.39■■□□□ 1.33
TPM4-201ENST00000300933 SCP2P22307 547 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 C11orf63Q6NUN7 778 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 EP400NLQ6ZTU2 488 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 YTHDF3Q7Z739 585 aaKnown RBP23.39■■□□□ 1.33
TPM4-201ENST00000300933 UBL4BQ8N7F7 174 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 MINDY3Q9H8M7 445 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 SLC40A1Q9NP59 571 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 GTF3C4Q9UKN8 822 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 CEP83Q9Y592 693 aa23.39■■□□□ 1.33
TPM4-201ENST00000300933 ATP2C2O75185 946 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 CEP57Q86XR8 500 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 TMEM192Q8IY95 271 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 CCDC114Q96M63 670 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 C11orf70Q9BRQ4 267 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 CLEC11AQ9Y240 323 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 DNAJC25-GNG10A0A024R161 153 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 O00370 1275 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 PIGRP01833 764 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 PRKCBP05771 671 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 UNGP13051 313 aaPredicted RBP23.38■■□□□ 1.33
TPM4-201ENST00000300933 KCNJ1P48048 391 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 POU5F1Q01860 360 aaKnown RBP23.38■■□□□ 1.33
TPM4-201ENST00000300933 MAP1SQ66K74 1059 aaPredicted RBP23.38■■□□□ 1.33
TPM4-201ENST00000300933 SCARA5Q6ZMJ2 495 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 CCDC26Q8TAB7 109 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 PTPN22Q9Y2R2 807 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 PCDHB2Q9Y5E7 798 aa23.38■■□□□ 1.33
TPM4-201ENST00000300933 CHRM1P11229 460 aaPredicted RBP23.37■■□□□ 1.33
TPM4-201ENST00000300933 OSBPP22059 807 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 CDR1P51861 262 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 MYL6P60660 151 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 TFAMQ00059 246 aaKnown RBP23.37■■□□□ 1.33
TPM4-201ENST00000300933 SPRED3Q2MJR0 410 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 EFCAB12Q6NXP0 572 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 CCDC62Q6P9F0 684 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 ATP8B4Q8TF62 1192 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 CGRRF1Q99675 332 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 BRCA2P51587 3418 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 IQCF3P0C7M6 154 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 HADHBP55084 474 aaKnown RBP23.37■■□□□ 1.33
TPM4-201ENST00000300933 DR1Q01658 176 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 EEF1DP3Q658K8 133 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 CCDC121Q6ZUS5 278 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 MCOLN2Q8IZK6 566 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 PRELID2Q8N945 189 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 SLC10A4Q96EP9 437 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 ACO2Q99798 780 aaKnown RBP23.37■■□□□ 1.33
TPM4-201ENST00000300933 TMEM134Q9H6X4 195 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 DONSONQ9NYP3 566 aa23.37■■□□□ 1.33
TPM4-201ENST00000300933 GOLGA6L10A6NI86 522 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 TMOD1P28289 359 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 GNA15P30679 374 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 MAPK4P31152 587 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 TTC27Q6P3X3 843 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 CD101Q93033 1021 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 SNX24Q9Y343 169 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 LOC285556D6RIA3 1793 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 HMGB1P1B2RPK0 211 aaPredicted RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 RASSF9O75901 435 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 WEE2P0C1S8 567 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 PTENP60484 403 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 MAPK6Q16659 721 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 IER5Q5VY09 327 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 RBBP8NLQ8NC74 664 aaPredicted RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 MAGOHBQ96A72 148 aaKnown RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 MRPL4Q9BYD3 311 aaKnown RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 UTP11Q9Y3A2 253 aaKnown RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 GOLGA6L7A0A1B0GV03 622 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 THAP12O43422 761 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 FAM189A1O60320 539 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 TOM1L1O75674 476 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 LDHAP00338 332 aaKnown RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 CLTAP09496 248 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 SLITRK6Q9H5Y7 841 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 KCNG1Q9UIX4 513 aa23.36■■□□□ 1.33
TPM4-201ENST00000300933 TTC7AQ9ULT0 858 aaPredicted RBP23.36■■□□□ 1.33
TPM4-201ENST00000300933 MROH7Q68CQ1 1323 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 A0A0G2JMZ2 1700 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 ZC3H11AO75152 810 aaKnown RBP eCLIP23.35■■□□□ 1.33
TPM4-201ENST00000300933 GJC1P36383 396 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 HSD17B3P37058 310 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 NSFP46459 744 aaKnown RBP23.35■■□□□ 1.33
TPM4-201ENST00000300933 UAP1Q16222 522 aaPredicted RBP23.35■■□□□ 1.33
TPM4-201ENST00000300933 ARMCX2Q7L311 632 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 ENOSF1Q7L5Y1 443 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 FASTKD5Q7L8L6 764 aaKnown RBP23.35■■□□□ 1.33
TPM4-201ENST00000300933 CCDC113Q9H0I3 377 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 LRRC4CQ9HCJ2 640 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 ZNF286BP0CG31 522 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 QPCTQ16769 361 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 ODF2Q5BJF6 829 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms