RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FMO5P49326 533 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SF3B3Q15393 1217 aaKnown RBP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RABGAP1LQ5R372 815 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PHF20Q9BVI0 1012 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZC4H2Q9NQZ6 224 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF609O15014 1411 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CHUKO15111 745 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SOAT1P35610 550 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FXR1P51114 621 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ARHGEF5Q12774 1597 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CNGA3Q16281 694 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM180AQ6UWF9 173 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 COG1Q8WTW3 980 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM96AQ9H5X1 160 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SHROOM2Q13796 1616 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SPATA31A3Q5VYP0 1347 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RAD51CO43502 376 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CCDC22O60826 627 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TWF1Q12792 350 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PTK7Q13308 1070 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EMC2Q15006 297 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C2CD6Q53TS8 623 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAXCQ5TGI0 409 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CLEC4FQ8N1N0 589 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TRIM45Q9H8W5 580 aaPredicted RBP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DAGLAQ9Y4D2 1042 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PATL1Q86TB9 770 aaKnown RBP14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 OR9Q1Q8NGQ5 310 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SPIRE2Q8WWL2 714 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM162AQ96A26 154 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TNIP3Q96KP6 325 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TRIM9Q9C026 710 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KDM4CQ9H3R0 1056 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KLK14Q9P0G3 267 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 LCMT1Q9UIC8 334 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KRT4P19013 534 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ASAP3Q8TDY4 903 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 THTPAQ9BU02 230 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CDHR2Q9BYE9 1310 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZBTB39O15060 712 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FUT11Q495W5 492 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NBPF10Q6P3W6 841 aaKnown RBP14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 USP49Q70CQ1 688 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NBPF15Q8N660 670 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PRR23AA6NEV1 266 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C5orf58C9J3I9 102 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GTF2H1P32780 548 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DCAF6Q58WW2 860 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TBC1D16Q8TBP0 767 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 LATS2Q9NRM7 1088 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DDHD2O94830 711 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 STK4Q13043 487 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM136AQ96C01 138 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZBTB22O15209 634 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NDUFS3O75489 264 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FKBP9O95302 570 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 UCHL3P15374 230 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PRKCEQ02156 737 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TAP1Q03518 808 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 STX3Q13277 289 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FKBP9P1Q75LS8 142 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ENOSF1Q7L5Y1 443 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM71DQ8N9W8 422 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PRRG1O14668 218 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 OR1G1P47890 313 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GTF2H3Q13889 308 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TRIM60Q495X7 471 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ISCA1Q9BUE6 129 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 WWP1Q9H0M0 922 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 WDR19Q8NEZ3 1342 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NPTXRO95502 500 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NDUFB10O96000 172 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 UBTFL6P0CB48 400 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MYL2P10916 166 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 COMTP21964 271 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ADCK1Q86TW2 530 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF555Q8NEP9 628 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NEDD1Q8NHV4 660 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PDXKO00764 312 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ORC4O43929 436 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZRANB3Q5FWF4 1079 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CDC42EP5Q6NZY7 148 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MIER2Q8N344 545 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF512Q96ME7 567 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 AGBL1Q96MI9 1066 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CNOT7Q9UIV1 285 aaKnown RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PNMA8BQ9ULN7 279 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ASB14A6NK59 587 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MAFGO15525 162 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms