RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 ZNF484Q5JVG2 852 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 SLC17A8Q8NDX2 589 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 MFSD14AQ96MC6 490 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 CELF4Q9BZC1 486 aaKnown RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 CA12O43570 354 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 RECQL4O94761 1208 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 AKR1A1P14550 325 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 KCNJ6P48051 423 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 PSMC1P62191 440 aaKnown RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 TMEM132DQ14C87 1099 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 SYCP2LQ5T4T6 812 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 ACOT1Q86TX2 421 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 AFAP1L1Q8TED9 768 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 WNT8BQ93098 351 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 APBA2Q99767 749 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 CCDC94Q9BW85 323 aaPredicted RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 RABEP2Q9H5N1 569 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 PDZD7Q9H5P4 517 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 KAT6AQ92794 2004 aa13.48□□□□□ -0.25
TTC17-202ENST00000299240 ZC3H4Q9UPT8 1303 aaKnown RBP13.48□□□□□ -0.25
TTC17-202ENST00000299240 O00370 1275 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 KCNJ1P48048 391 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 L2HGDHQ9H9P8 463 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 SNX12Q9UMY4 172 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 MAGEB2O15479 319 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 C4BPAP04003 597 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 FMO1Q01740 532 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 PSMD6Q15008 389 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 LONRF2Q1L5Z9 754 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.47□□□□□ -0.25
TTC17-202ENST00000299240 KRIT1O00522 736 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 TSPAN1O60635 241 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 LGR5O75473 907 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 UPP2O95045 317 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 ATF7P17544 494 aaPredicted RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 SCP2P22307 547 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 CPT1AP50416 773 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 JAM2P57087 298 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 TNNC1P63316 161 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 KCNT1Q5JUK3 1230 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 BRSK2Q8IWQ3 736 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 KCTD17Q8N5Z5 321 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 C1orf127Q8N9H9 656 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 ZNF564Q8TBZ8 553 aaPredicted RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
TTC17-202ENST00000299240 BZW2Q9Y6E2 419 aaKnown RBP13.47□□□□□ -0.25
TTC17-202ENST00000299240 SMIM23A6NLE4 172 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 RPS6KA5O75582 802 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 COMTP21964 271 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 C8orf74Q6P047 294 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 GAD1Q99259 594 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 CGRRF1Q99675 332 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 KATNBL1Q9H079 304 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 ABCB6Q9NP58 842 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 ALG6Q9Y672 507 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 CHRNB2P17787 502 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 CD52P31358 61 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
TTC17-202ENST00000299240 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
TTC17-202ENST00000299240 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 GTF3C2Q8WUA4 911 aaPredicted RBP13.46□□□□□ -0.25
TTC17-202ENST00000299240 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 ZWILCHQ9H900 591 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.25
TTC17-202ENST00000299240 EFCAB8A8MWE9 144 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 CLTAP09496 248 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.26
TTC17-202ENST00000299240 ATP11AP98196 1134 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 PLCB3Q01970 1234 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.26
TTC17-202ENST00000299240 DPP3Q9NY33 737 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 AMACRQ9UHK6 382 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 GJD2Q9UKL4 321 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.26
TTC17-202ENST00000299240 CDY2AQ9Y6F7 541 aa13.46□□□□□ -0.26
TTC17-202ENST00000299240 M0QYV0 167 aa13.45□□□□□ -0.26
TTC17-202ENST00000299240 ARPP19P56211 112 aa13.45□□□□□ -0.26
TTC17-202ENST00000299240 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms