RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 SATB1Q01826 763 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 DCAF4L1Q3SXM0 396 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 APBB1IPQ7Z5R6 666 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 DNAJB3Q8WWF6 145 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 OSMRQ99650 979 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 EPC1Q9H2F5 836 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 GOLPH3Q9H4A6 298 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 MEFVO15553 781 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 TREHO43280 583 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 AOC2O75106 756 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 TOMM70O94826 608 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 CALCAP01258 141 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 GJA9P57773 515 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 PRKCZQ05513 592 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 TCEAL1Q15170 157 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 CLEC16AQ2KHT3 1053 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 JADE1Q6IE81 842 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 CATSPER4Q7RTX7 472 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF572Q7Z3I7 529 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 UBR7Q8N806 425 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 NOA1Q8NC60 698 aaKnown RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 RBBP8NLQ8NC74 664 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
C9orf3-202ENST00000297979 CASP8AP2Q9UKL3 1982 aa15.26■□□□□ 0.03
C9orf3-202ENST00000297979 MYADML2A6NDP7 307 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 GNAT1P11488 350 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 DARSP14868 501 aaKnown RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 HADHBP55084 474 aaKnown RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 SLC10A6Q3KNW5 377 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 PEX26Q7Z412 305 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 C7orf31Q8N865 590 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 TAF4BQ92750 862 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 XYLT2Q9H1B5 865 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 CDHR5Q9HBB8 845 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 MROH7Q68CQ1 1323 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 KIF4AO95239 1232 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 HOXC8P31273 242 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 GRM5P41594 1212 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 DNA2P51530 1060 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 ACAD10Q6JQN1 1059 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 ACAP3Q96P50 834 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 CTTNBP2NLQ9P2B4 639 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 RNF14Q9UBS8 474 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 GNA15P30679 374 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 PAFAH1B1P43034 410 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 GNASQ5JWF2 1037 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 C1orf127Q8N9H9 656 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
C9orf3-202ENST00000297979 ANKZF1Q9H8Y5 726 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 SIX4Q9UIU6 781 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 COG5Q9UP83 839 aa15.25■□□□□ 0.03
C9orf3-202ENST00000297979 KRT19P08727 400 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 HOXA11P31270 313 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF132P52740 706 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 ITIH3Q06033 890 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 NOTUMQ6P988 496 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 SLC27A1Q6PCB7 646 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 PARD6BQ9BYG5 372 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 SPC25Q9HBM1 224 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 STXBP5LQ9Y2K9 1186 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 CES2O00748 559 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 SEPT4O43236 478 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 NPTXRO95502 500 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 UNGP13051 313 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 TMEM132DQ14C87 1099 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 SMYD5Q6GMV2 418 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 MSANTD4Q8NCY6 345 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF653Q96CK0 615 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-202ENST00000297979 ABCB6Q9NP58 842 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 GTF3C4Q9UKN8 822 aa15.24■□□□□ 0.03
C9orf3-202ENST00000297979 CYP1A2P05177 515 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 RARBP10826 455 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 ASPAP45381 313 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 SP3Q02447 781 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 TRIM72Q6ZMU5 477 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 CD302Q8IX05 232 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 NME8Q8N427 588 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 CISHQ9NSE2 258 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 C2CD2Q9Y426 696 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 CITO14578 2027 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 RALGAPA2Q2PPJ7 1873 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms