RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
TRA2A-201ENST00000297071 CYLDQ9NQC7 956 aa20.35■□□□□ 0.85
TRA2A-201ENST00000297071 RAB20Q9NX57 234 aa20.35■□□□□ 0.85
TRA2A-201ENST00000297071 CHKBQ9Y259 395 aa20.35■□□□□ 0.85
TRA2A-201ENST00000297071 RRM1P23921 792 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 CETN2P41208 172 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 SF3A3Q12874 501 aaKnown RBP eCLIP20.34■□□□□ 0.851e-9■□□□□ 8.3
TRA2A-201ENST00000297071 SNRNP35Q16560 246 aaKnown RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 SHROOM1Q2M3G4 852 aaPredicted RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 SMYD5Q6GMV2 418 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.34■□□□□ 0.852e-6■■■■■ 34.8
TRA2A-201ENST00000297071 C10orf82Q8WW14 230 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 C2CD2LO14523 706 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 DNALI1O14645 258 aaPredicted RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 CYP1A1P04798 512 aaPredicted RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 TPBGLP0DKB5 382 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 ATP6V1C1P21283 382 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 MRPS35P82673 323 aaKnown RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 GHRHRQ02643 423 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 LBRQ14739 615 aaKnown RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 SGSM1Q2NKQ1 1148 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 FAM160B2Q86V87 743 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 CEP120Q8N960 986 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 ZFATQ9P243 1243 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 TRIM33Q9UPN9 1127 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 DRG1Q9Y295 367 aaKnown RBP20.34■□□□□ 0.85
TRA2A-201ENST00000297071 UMODL1Q5DID0 1318 aa20.34■□□□□ 0.85
TRA2A-201ENST00000297071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
TRA2A-201ENST00000297071 A0A1W2PRG0 241 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 ECE2O60344 883 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 GCAP28676 217 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 NSMFQ6X4W1 530 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 MAP4K3Q8IVH8 894 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 LMNTD2Q8IXW0 634 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 ATG4AQ8WYN0 398 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 SLC7A6OSQ96CW6 309 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-201ENST00000297071 ERP27Q96DN0 273 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 RBM15Q96T37 977 aaKnown RBP eCLIP20.33■□□□□ 0.852e-7■■■■□ 22
TRA2A-201ENST00000297071 HERPUD2Q9BSE4 406 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 OSBPL8Q9BZF1 889 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 MRPL47Q9HD33 250 aaKnown RBP20.33■□□□□ 0.85
TRA2A-201ENST00000297071 MLXIPLQ9NP71 852 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 CHORDC1Q9UHD1 332 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-201ENST00000297071 SERPINA10Q9UK55 444 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 PCDHB2Q9Y5E7 798 aa20.33■□□□□ 0.85
TRA2A-201ENST00000297071 MYPNQ86TC9 1320 aa20.33■□□□□ 0.84
TRA2A-201ENST00000297071 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
TRA2A-201ENST00000297071 ACADSP16219 412 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 QARSP47897 775 aaKnown RBP20.32■□□□□ 0.84
TRA2A-201ENST00000297071 FAM13CQ8NE31 585 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 TRABDQ9H4I3 376 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 HERC5Q9UII4 1024 aaKnown RBP20.32■□□□□ 0.84
TRA2A-201ENST00000297071 R3HDM2Q9Y2K5 976 aaKnown RBP20.32■□□□□ 0.84
TRA2A-201ENST00000297071 TMX2Q9Y320 296 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 EXOC1LA0A1B0GW35 172 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 FAM196BA6NMK8 535 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 ZWINTO95229 277 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 SLURP2P0DP57 97 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 PTPN4P29074 926 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 PTPN7P35236 360 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 HSD17B4P51659 736 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 MORF4L2Q15014 288 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 TMED2Q15363 201 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 LIN9Q5TKA1 542 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 C4orf19Q8IY42 314 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 LRRC8CQ8TDW0 803 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 ASAP3Q8TDY4 903 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 SMC6Q96SB8 1091 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 DCLRE1BQ9H816 532 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 KIAA1586Q9HCI6 787 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 ANKEF1Q9NU02 776 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 ZHX2Q9Y6X8 837 aa20.32■□□□□ 0.84
TRA2A-201ENST00000297071 SCN9AQ15858 1988 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 TISP43B9A030 160 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 ALOX15BO15296 676 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 DHX15O43143 795 aaKnown RBP20.31■□□□□ 0.84
TRA2A-201ENST00000297071 GH2P01242 217 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 T-ENOLP0DO92 83 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 RALAP11233 206 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 ABL2P42684 1182 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 MCL1Q07820 350 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 PSME4Q14997 1843 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 MON1BQ7L1V2 547 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 C17orf75Q9HAS0 396 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 SCINQ9Y6U3 715 aa20.31■□□□□ 0.84
TRA2A-201ENST00000297071 MYH9P35579 1960 aaKnown RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 GSTTP1A0A1W2PQM5 241 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TYROBPO43914 113 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 GDF11O95390 407 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 FDX1P10109 184 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 ABCD1P33897 745 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TCP10Q12799 353 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 C15orf39Q6ZRI6 1047 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 APBB1IPQ7Z5R6 666 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 SPIRE2Q8WWL2 714 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms