RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 GJB5O95377 273 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 PON1P27169 355 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 PBX3P40426 434 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 AP3M2P53677 418 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 TRPC3Q13507 836 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 FBXL13Q8NEE6 735 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
CCDC140-201ENST00000295226 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 INTS2Q9H0H0 1204 aaKnown RBP16.32■□□□□ 0.2
CCDC140-201ENST00000295226 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
CCDC140-201ENST00000295226 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 TUSC3Q13454 348 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 GJB7Q6PEY0 223 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 COLGALT2Q8IYK4 626 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 TATDN2Q93075 761 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 FAM193BQ96PV7 902 aaPredicted RBP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 LSM14BQ9BX40 385 aaKnown RBP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
CCDC140-201ENST00000295226 KANSL3Q9P2N6 904 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 SIK3Q9Y2K2 1263 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 COQ4Q9Y3A0 265 aa16.31■□□□□ 0.2
CCDC140-201ENST00000295226 ANO9A1A5B4 782 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 PODXLO00592 558 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 EPHB6O15197 1021 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 MYOGP15173 224 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 CYP3A5P20815 502 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 PBX1P40424 430 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 OR1G1P47890 313 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 RBP5P82980 135 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 DSC1Q08554 894 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 BTG3Q14201 252 aaPredicted RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 DPY19L2P1Q6NXN4 242 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 C3orf58Q8NDZ4 430 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 ERGIC2Q96RQ1 377 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 TSPAN18Q96SJ8 248 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 XYLT2Q9H1B5 865 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 MTIF3Q9H2K0 278 aaKnown RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 PRG3Q9Y2Y8 225 aaPredicted RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 LCHNA4D1U4 455 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 PIRO00625 290 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 SPTLC1O15269 473 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 PMM2O15305 246 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 P4HA2O15460 535 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 ITGB1P05556 798 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 LRPAP1P30533 357 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 CETN1Q12798 172 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 UPP1Q16831 310 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 CWH43Q9H720 699 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
CCDC140-201ENST00000295226 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
CCDC140-201ENST00000295226 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
CCDC140-201ENST00000295226 TLL1O43897 1013 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 SLC11A1P49279 550 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 HTRA4P83105 476 aaPredicted RBP16.29■□□□□ 0.2
CCDC140-201ENST00000295226 SPOUT1Q5T280 376 aaKnown RBP16.29■□□□□ 0.2
CCDC140-201ENST00000295226 PHLDB3Q6NSJ2 640 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 KAT5Q92993 513 aa16.29■□□□□ 0.2
CCDC140-201ENST00000295226 NXF1Q9UBU9 619 aaKnown RBP16.29■□□□□ 0.2
CCDC140-201ENST00000295226 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
CCDC140-201ENST00000295226 I3L4J1 428 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 B3GAT3O94766 335 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 NOL4O94818 638 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
CCDC140-201ENST00000295226 BCAR1P56945 870 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 SPC24Q8NBT2 197 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 RAD9AQ99638 391 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 MRPL9Q9BYD2 267 aaKnown RBP16.28■□□□□ 0.2
CCDC140-201ENST00000295226 SPTLC3Q9NUV7 552 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 INSL6Q9Y581 213 aa16.28■□□□□ 0.2
CCDC140-201ENST00000295226 NRP1O14786 923 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms