RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 FNTAP49354 379 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 GUCY1A3Q02108 690 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 KRT33BQ14525 404 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MTBPQ96DY7 904 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 ZBED2Q9BTP6 218 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MLXIPLQ9NP71 852 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 AGPAT3Q9NRZ7 376 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 CCDC195A0A1B0GUA6 201 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 RAD51CO43502 376 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 Q4G0T1 1027 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 KBTBD4Q9NVX7 518 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 MTSS1O43312 755 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 DDX5P17844 614 aaKnown RBP13.45□□□□□ -0.26
PTCD1-201ENST00000292478 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 NCLNQ969V3 563 aa13.45□□□□□ -0.26
PTCD1-201ENST00000292478 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 BNIP3LO60238 219 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 CPB1P15086 417 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 CDC26Q8NHZ8 85 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 TJP2Q9UDY2 1190 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SPATA31D1Q6ZQQ2 1576 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 CYP2C8P10632 490 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 CHN1P15882 459 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SREBF1P36956 1147 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 PNPLA4P41247 253 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 MYBPC2Q14324 1141 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SEC23AQ15436 765 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 EFHC1Q5JVL4 640 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 OR6P1Q8NGX9 317 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SIK2Q9H0K1 926 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 RANBP17Q9H2T7 1088 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ZC3H7BQ9UGR2 993 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 XPO7Q9UIA9 1087 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SALL1Q9NSC2 1324 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 FAM47DPA6NHR8 397 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 TCP11X1B4DZS4 312 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 AARSP49588 968 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ZNF200P98182 395 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 LAMC2Q13753 1193 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 PDCD6IPQ8WUM4 868 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 PRMT1Q99873 361 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 SMYD3Q9H7B4 428 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 DFFAO00273 331 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 ANP32DO95626 131 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 GPD1P21695 349 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 PDK1Q15118 436 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 XPO6Q96QU8 1125 aaKnown RBP13.44□□□□□ -0.26
PTCD1-201ENST00000292478 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 L2HGDHQ9H9P8 463 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 TRIM10Q9UDY6 481 aa13.44□□□□□ -0.26
PTCD1-201ENST00000292478 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 TNPO2O14787 897 aaKnown RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 PSTPIP1O43586 416 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 MYO1DO94832 1006 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 MOCS2O96007 188 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 KLRC1P26715 233 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 GRIN1Q05586 938 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 ANKMY2Q8IV38 441 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 AGGF1Q8N302 714 aaeCLIP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 HACD3Q9P035 362 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 USP15Q9Y4E8 981 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 SNX17Q15036 470 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 CD302Q8IX05 232 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 TPCN2Q8NHX9 752 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 CCT8L2Q96SF2 557 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 MMTAG2Q9BU76 263 aaKnown RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 SLC37A4O43826 429 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 ABCE1P61221 599 aaKnown RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 HIPK4Q8NE63 616 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 TRIM45Q9H8W5 580 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 RAB6BQ9NRW1 208 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 OLA1Q9NTK5 396 aaKnown RBP13.43□□□□□ -0.26
PTCD1-201ENST00000292478 PPME1Q9Y570 386 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 PFDN1O60925 122 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 PCSK1P29120 753 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 EEF1DP29692 281 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms