RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 ZMYM2Q9UBW7 1377 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 PABPC4LP0CB38 370 aaKnown RBP14.37□□□□□ -0.11
RDH13-201ENST00000291892 CHRNDQ07001 517 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 GRAMD1BQ3KR37 738 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 C6orf163Q5TEZ5 329 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 IZUMO3Q5VZ72 239 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 DAGLBQ8NCG7 672 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 GSTCDQ8NEC7 633 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.37□□□□□ -0.11
RDH13-201ENST00000291892 PIP4K2CQ8TBX8 421 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 TMEM47Q9BQJ4 181 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 HERPUD2Q9BSE4 406 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 TRIM55Q9BYV6 548 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 LRRC27Q9C0I9 530 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
RDH13-201ENST00000291892 MYO3BQ8WXR4 1341 aa14.37□□□□□ -0.11
RDH13-201ENST00000291892 TRIM43BA6NCK2 446 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 DKC1O60832 514 aaKnown RBP eCLIP14.36□□□□□ -0.11
RDH13-201ENST00000291892 CYP11B2P19099 503 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 MAGEA4P43358 317 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 EPHB1P54762 984 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 MARSP56192 900 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 SIX1Q15475 284 aaPredicted RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 ZNF568Q3ZCX4 644 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 SLC26A7Q8TE54 656 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 SHCBP1LQ9BZQ2 653 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 KLHL4Q9C0H6 718 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 SLC17A7Q9P2U7 560 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 SH3GLB1Q9Y371 365 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 PCDHA2Q9Y5H9 948 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 FCHO1O14526 889 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 ITIH2P19823 946 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 PEX2P28328 305 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 PCSK6P29122 969 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 PSMC6P62333 389 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 ASPHQ12797 758 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 EFTUD2Q15029 972 aaKnown RBP eCLIP14.36□□□□□ -0.115e-6■■□□□ 11.5
RDH13-201ENST00000291892 KNOP1Q1ED39 458 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 CBWD6Q4V339 395 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 TMEM119Q4V9L6 283 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 CBWD3Q5JTY5 395 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 CBWD5Q5RIA9 395 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 KLC3Q6P597 504 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 RHBDF2Q6PJF5 856 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 HOMEZQ8IX15 550 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 RBM15BQ8NDT2 890 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 DENND1AQ8TEH3 1009 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 WHRNQ9P202 907 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 BTBD7Q9P203 1132 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 FAM237BA0A1B0GVD1 139 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 SORBS2O94875 1100 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 MYL2P10916 166 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 CDK4P11802 303 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 VARSP26640 1264 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 PRDX5P30044 214 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 NOP14P78316 857 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 CYP4A11Q02928 519 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 COG2Q14746 738 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 STAT4Q14765 748 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 C2CD6Q53TS8 623 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 MTBPQ96DY7 904 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 TUT1Q9H6E5 874 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 PPARGC1AQ9UBK2 798 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 DDX25Q9UHL0 483 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 LGALS13Q9UHV8 139 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 APPL1Q9UKG1 709 aa14.36□□□□□ -0.11
RDH13-201ENST00000291892 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
RDH13-201ENST00000291892 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 ALOX15P16050 662 aaPredicted RBP14.35□□□□□ -0.11
RDH13-201ENST00000291892 RXRBP28702 533 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 HOXD13P35453 343 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 MLH1P40692 756 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
RDH13-201ENST00000291892 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
RDH13-201ENST00000291892 IGBP1P78318 339 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 TRIM28Q13263 835 aaKnown RBP14.35□□□□□ -0.11
RDH13-201ENST00000291892 ZFYVE27Q5T4F4 411 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 NCCRP1Q6ZVX7 275 aaPredicted RBP14.35□□□□□ -0.11
RDH13-201ENST00000291892 CCDC110Q8TBZ0 833 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 RUSC1Q9BVN2 902 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 NUP85Q9BW27 656 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 LIN28AQ9H9Z2 209 aaKnown RBP14.35□□□□□ -0.11
RDH13-201ENST00000291892 KIF1AQ12756 1690 aa14.35□□□□□ -0.11
RDH13-201ENST00000291892 CYLC2Q14093 348 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms