RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TRIM49P0CI25 452 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TRIM49CP0CI26 452 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TNNI1P19237 187 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PNPLA4P41247 253 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 GRIK3Q13003 919 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TTC39CQ8N584 583 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 SPATA18Q8TC71 538 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TRIM43Q96BQ3 446 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PANX2Q96RD6 677 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 ADAM2Q99965 735 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 IL23AQ9NPF7 189 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TDRD15B5MCY1 1934 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM191BP0C7N4 346 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 LRPAP1P30533 357 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 CDK17Q00537 523 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 GCNT1Q02742 428 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 PPP2R5DQ14738 602 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 KLHDC7AQ5VTJ3 777 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 EFCAB13Q8IY85 973 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 LRRC52Q8N7C0 313 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 CXorf38Q8TB03 319 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 LSM14BQ9BX40 385 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ARGLU1Q9NWB6 273 aaPredicted RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 RAB20Q9NX57 234 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 KANSL3Q9P2N6 904 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 VNN1O95497 513 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ACTN1P12814 892 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ATF7P17544 494 aaPredicted RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 TBXAS1P24557 533 aaPredicted RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 JAM2P57087 298 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 SV2AQ7L0J3 742 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 TMC6Q7Z403 805 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ABHD8Q96I13 439 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 RSAD1Q9HA92 442 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 SPTA1P02549 2419 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ANXA13P27216 316 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 GCLMP48507 274 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 IKBKEQ14164 716 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 SGSM1Q2NKQ1 1148 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM192Q8IY95 271 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 URGCPQ8TCY9 931 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 MRPL9Q9BYD2 267 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 UMODL1Q5DID0 1318 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ENPP3O14638 875 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 MFAP3LO75121 409 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 NFICP08651 508 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 HNRNPH3P31942 346 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 RPL9P32969 192 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ARPP19P56211 112 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 WNT7BP56706 349 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 ZRSR2Q15696 482 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 CEP120Q8N960 986 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 DPP3Q9NY33 737 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 PTPRSQ13332 1948 aa9.05□□□□□ -0.96
PTPDC1-201ENST00000288976 GOLGA6L10A6NI86 522 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 NOL4O94818 638 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 P4HA1P13674 534 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 YWHAEP62258 255 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 ZBED6P86452 979 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 NAB2Q15742 525 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 WDR44Q5JSH3 913 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 PSRC1Q6PGN9 363 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 RTN4RL1Q86UN2 441 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 CCDC127Q96BQ5 260 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 EEF2KMTQ96G04 330 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 ZNF560Q96MR9 790 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 NUB1Q9Y5A7 615 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 DNAJC13O75165 2243 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 FNDC1Q4ZHG4 1894 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 SMIM28A0A1B0GU29 152 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 AKR1B15C9JRZ8 316 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 ASS1P00966 412 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 GYPCP04921 128 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 CYP2C18P33260 490 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 RBP5P82980 135 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 TTC30AQ86WT1 665 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 NT5C1BQ96P26 610 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 MTMR12Q9C0I1 747 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 ATP8B3O60423 1300 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 ARL5CA6NH57 179 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM189-UBE2V1I3L0A0 370 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 HLA-DRAP01903 254 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 AMHP03971 560 aa9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 GBP2P32456 591 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-201ENST00000288976 MFAP3P55082 362 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms