RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CTC1Q2NKJ3 1217 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CEP135Q66GS9 1140 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 KIAA1841Q6NSI8 718 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 PRSS55Q6UWB4 352 aaPredicted RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 VN1R2Q8NFZ6 395 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 RIN2Q8WYP3 895 aaPredicted RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 TTPALQ9BTX7 342 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 MTMR12Q9C0I1 747 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 NUB1Q9Y5A7 615 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CLASP2O75122 1294 aaKnown RBP21.49■■□□□ 1.03
TIMP4-201ENST00000287814 DLATP10515 647 aaKnown RBP21.49■■□□□ 1.03
TIMP4-201ENST00000287814 TKTP29401 623 aaKnown RBP21.49■■□□□ 1.03
TIMP4-201ENST00000287814 ELAVL2Q12926 359 aaKnown RBP21.49■■□□□ 1.03
TIMP4-201ENST00000287814 ADAM9Q13443 819 aa21.49■■□□□ 1.03
TIMP4-201ENST00000287814 BMS1Q14692 1282 aaKnown RBP21.49■■□□□ 1.03
TIMP4-201ENST00000287814 ZNF516Q92618 1163 aa21.49■■□□□ 1.03
TIMP4-201ENST00000287814 KLHL5Q96PQ7 755 aa21.49■■□□□ 1.03
TIMP4-201ENST00000287814 UNC80Q8N2C7 3258 aa21.49■■□□□ 1.03
TIMP4-201ENST00000287814 GLP2RO95838 553 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 LTBRP36941 435 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 AARSP49588 968 aaKnown RBP eCLIP21.48■■□□□ 1.03
TIMP4-201ENST00000287814 LILRA4P59901 499 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 DLX2Q07687 328 aaPredicted RBP21.48■■□□□ 1.03
TIMP4-201ENST00000287814 ADAM15Q13444 863 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 KCNC3Q14003 757 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 SURF1Q15526 300 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 EDRF1Q3B7T1 1238 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 TRIML1Q8N9V2 468 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 LNX1Q8TBB1 728 aaPredicted RBP21.48■■□□□ 1.03
TIMP4-201ENST00000287814 CACTINQ8WUQ7 758 aaKnown RBP21.48■■□□□ 1.03
TIMP4-201ENST00000287814 PPP2R3CQ969Q6 453 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 SUSD3Q96L08 255 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 RXFP1Q9HBX9 757 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 SIX4Q9UIU6 781 aa21.48■■□□□ 1.03
TIMP4-201ENST00000287814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 TEX28O15482 410 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 TRAPPC3O43617 180 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 ITGB3P05106 788 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 RPL17P18621 184 aaKnown RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 CCNE1P24864 410 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 DLG4P78352 724 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 KLHL10Q6JEL2 608 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 WDR49Q8IV35 697 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 EFHBQ8N7U6 833 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 PARD3BQ8TEW8 1205 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 PABPC5Q96DU9 382 aaKnown RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 DHTKD1Q96HY7 919 aaPredicted RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 CGRRF1Q99675 332 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 CLDND1Q9NY35 253 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 TMEM191BP0C7N4 346 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 POLR2BP30876 1174 aaKnown RBP21.47■■□□□ 1.03
TIMP4-201ENST00000287814 DUOXA2Q1HG44 320 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 CSGALNACT2Q8N6G5 542 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 PIK3R5Q8WYR1 880 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 BORCS6Q96GS4 357 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 FNBP1Q96RU3 617 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 AGAP1Q9UPQ3 857 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
TIMP4-201ENST00000287814 VWA8A3KMH1 1905 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 BRWD1Q9NSI6 2320 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 LRRIQ3A6PVS8 624 aaPredicted RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 M0QZQ0 153 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 PSMA7O14818 248 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 TNNI1P19237 187 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 RPL13P26373 211 aaKnown RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 TFF2Q03403 129 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 STIM1Q13586 685 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 RSPO2Q6UXX9 243 aaPredicted RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 ZC3H3Q8IXZ2 948 aaKnown RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 GPR65Q8IYL9 337 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 HLA-CQ95604 372 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 ANKRD36BP1Q96IX9 119 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 CDCA3Q99618 268 aaPredicted RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 DUSP9Q99956 384 aaKnown RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 UBE2ZQ9H832 354 aaPredicted RBP21.46■■□□□ 1.03
TIMP4-201ENST00000287814 SSX2IPQ9Y2D8 614 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 HCFC2Q9Y5Z7 792 aa21.46■■□□□ 1.03
TIMP4-201ENST00000287814 ADAM12O43184 909 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 TBX10O75333 385 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 CLDN10P78369 228 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 C1orf220Q5T0J3 134 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 TTI2Q6NXR4 508 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 LLGL2Q6P1M3 1020 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 TRAPPC11Q7Z392 1133 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 GLYCTKQ8IVS8 523 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 SLC22A17Q8WUG5 538 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 NELFBQ8WX92 580 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 CLSTN3Q9BQT9 956 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 EMILIN2Q9BXX0 1053 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 CLEC1BQ9P126 229 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 ITGA11Q9UKX5 1188 aa21.45■■□□□ 1.02
TIMP4-201ENST00000287814 TIMM13Q9Y5L4 95 aaPredicted RBP21.45■■□□□ 1.02
TIMP4-201ENST00000287814 NCK2O43639 380 aa21.44■■□□□ 1.02
TIMP4-201ENST00000287814 CST3P01034 146 aaPredicted RBP21.44■■□□□ 1.02
TIMP4-201ENST00000287814 KLRC2P26717 231 aa21.44■■□□□ 1.02
TIMP4-201ENST00000287814 PSMC2P35998 433 aaKnown RBP21.44■■□□□ 1.02
TIMP4-201ENST00000287814 PPP1R2P41236 205 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms