RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 HIDE1A8MVS5 230 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 FSCN2O14926 492 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 GTF2F1P35269 517 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATG3-201ENST00000283290 PSMC2P35998 433 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 DDX53Q86TM3 631 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 RBM23Q86U06 439 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 ENTPD7Q9NQZ7 604 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 RWDD2AQ9UIY3 292 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 AGAP1Q9UPQ3 857 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 DERAQ9Y315 318 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 TIMM13Q9Y5L4 95 aaPredicted RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 TSC2P49815 1807 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 LRPAP1P30533 357 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 VAMP7P51809 220 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 CDR1P51861 262 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 TYRO3Q06418 890 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 FAM171A1Q5VUB5 890 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 DCLRE1AQ6PJP8 1040 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 PRSS55Q6UWB4 352 aaPredicted RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 TMC7Q7Z402 723 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 GLYCTKQ8IVS8 523 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 ZC3H3Q8IXZ2 948 aaKnown RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 SYAP1Q96A49 352 aaPredicted RBP18.81■□□□□ 0.6
ATG3-201ENST00000283290 BORCS6Q96GS4 357 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 NUB1Q9Y5A7 615 aa18.81■□□□□ 0.6
ATG3-201ENST00000283290 PLXNA3P51805 1871 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 PER2O15055 1255 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 LRRN2O75325 713 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 CST3P01034 146 aaPredicted RBP18.8■□□□□ 0.6
ATG3-201ENST00000283290 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
ATG3-201ENST00000283290 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
ATG3-201ENST00000283290 PPP1R2P41236 205 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 GCLMP48507 274 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 RBM10P98175 930 aaKnown RBP18.8■□□□□ 0.6
ATG3-201ENST00000283290 PPP3CAQ08209 521 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 MYBPC2Q14324 1141 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 DCAF17Q5H9S7 520 aaPredicted RBP18.8■□□□□ 0.6
ATG3-201ENST00000283290 RTP2Q5QGT7 225 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 TRAPPC11Q7Z392 1133 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 WDR49Q8IV35 697 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 CXorf38Q8TB03 319 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 TMEM174Q8WUU8 243 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 ANKRD36BP1Q96IX9 119 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 UROC1Q96N76 676 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 ZBP1Q9H171 429 aa18.8■□□□□ 0.6
ATG3-201ENST00000283290 ANO9A1A5B4 782 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 PIRO00625 290 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 XPOTO43592 962 aaKnown RBP18.79■□□□□ 0.6
ATG3-201ENST00000283290 EFEMP2O95967 443 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 TNNC2P02585 160 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 RPL17P18621 184 aaKnown RBP18.79■□□□□ 0.6
ATG3-201ENST00000283290 CYP3A5P20815 502 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 POU5F1Q01860 360 aaKnown RBP18.79■□□□□ 0.6
ATG3-201ENST00000283290 HYAL1Q12794 435 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 BFSP1Q12934 665 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 STX1AQ16623 288 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 TCERG1LQ5VWI1 586 aa18.79■□□□□ 0.6
ATG3-201ENST00000283290 TDRD10Q5VZ19 366 aaKnown RBP18.79■□□□□ 0.6
ATG3-201ENST00000283290 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
ATG3-201ENST00000283290 SF3B1O75533 1304 aaKnown RBP eCLIP18.78■□□□□ 0.69e-6■■■■■ 68.9
ATG3-201ENST00000283290 CXCL14O95715 111 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 KRT13P13646 458 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 PTMSP20962 102 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
ATG3-201ENST00000283290 BIRC3Q13489 604 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 DUOXA2Q1HG44 320 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 ANO6Q4KMQ2 910 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 RNF168Q8IYW5 571 aaPredicted RBP18.78■□□□□ 0.6
ATG3-201ENST00000283290 CACTINQ8WUQ7 758 aaKnown RBP18.78■□□□□ 0.6
ATG3-201ENST00000283290 IGFLR1Q9H665 355 aa18.78■□□□□ 0.6
ATG3-201ENST00000283290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 CLSTN1O94985 981 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 VNN1O95497 513 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 SOD2P04179 222 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 NRIP1P48552 1158 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 LILRA4P59901 499 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 SMC1AQ14683 1233 aaKnown RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 SURF1Q15526 300 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 PDE12Q6L8Q7 609 aaKnown RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 HERC2P3Q9BVR0 1158 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 NGRNQ9NPE2 291 aaKnown RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 SAMSN1Q9NSI8 373 aaKnown RBP18.77■□□□□ 0.6
ATG3-201ENST00000283290 ANO10Q9NW15 660 aa18.77■□□□□ 0.6
ATG3-201ENST00000283290 C2orf71A6NGG8 1288 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 PHACTR2O75167 634 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
ATG3-201ENST00000283290 CTSAP10619 480 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 MYL6P60660 151 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 PTPN14Q15678 1187 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 TPD52L1Q16890 204 aaPredicted RBP18.76■□□□□ 0.59
ATG3-201ENST00000283290 KIAA1841Q6NSI8 718 aa18.76■□□□□ 0.59
ATG3-201ENST00000283290 DSTYKQ6XUX3 929 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms