RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 HUNKP57058 714 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 DAB2P98082 770 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 RBL2Q08999 1139 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 EPHA7Q15375 998 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM71Q2Q1W2 868 aaKnown RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ANKRD40Q6AI12 368 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 CCNJLQ8IV13 435 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 SUGP1Q8IWZ8 645 aaKnown RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 AGBL3Q8NEM8 1001 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 BTN2A2Q8WVV5 523 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 SEPT1Q8WYJ6 367 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 RAPGEF5Q92565 580 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 NIF3L1Q9GZT8 377 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 COPS7BQ9H9Q2 264 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 KLHL11Q9NVR0 708 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 BARHL2Q9NY43 387 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ADA2Q9NZK5 511 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ZC3H7BQ9UGR2 993 aaKnown RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 MAGED2Q9UNF1 606 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 A0A088AWK7 358 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 EVPLLA8MZ36 301 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 RPS6KA5O75582 802 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 URODP06132 367 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ITGA4P13612 1032 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF10P21506 573 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 SLC11A2P49281 568 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 EMC2Q15006 297 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 RESP18Q5W5W9 173 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 USP17L6PQ6QN14 398 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 HHIPL2Q6UWX4 724 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 CYFIP2Q96F07 1278 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 BPIFA3Q9BQP9 254 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 FAM217BQ9NTX9 383 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 UBQLN1Q9UMX0 589 aaKnown RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 OPLAHO14841 1288 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 XYLBO75191 536 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ANXA9O76027 345 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 EYA4O95677 639 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SPRP35270 261 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MTMR2Q13614 643 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CCNG2Q16589 344 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ITIH5Q86UX2 942 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 EDC3Q96F86 508 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CAMKK2Q96RR4 588 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MRPL9Q9BYD2 267 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PUS3Q9BZE2 481 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NYAP2Q9P242 653 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CLIC4Q9Y696 253 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ENC1O14682 589 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 VPS26AO75436 327 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DAB1O75553 588 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 KRT20P35900 424 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF157P51786 506 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ARFIP2P53365 341 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DYNLL1P63167 89 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PDIA6Q15084 440 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 BOLA3Q53S33 107 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 C11orf88Q6PI97 169 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DPP10Q8N608 796 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PIGOQ8TEQ8 1089 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MKNK1Q9BUB5 465 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NT5C1AQ9BXI3 368 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CD209Q9NNX6 404 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 TMEM63CQ9P1W3 806 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 VTI1BQ9UEU0 232 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SYNCRIPO60506 623 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PRMT3O60678 531 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SOAT2O75908 522 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NUP62P37198 522 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 MRPS15P82914 257 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PDIA2Q13087 525 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 UBE2SQ16763 222 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 FAM133BQ5BKY9 247 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 LDHDQ86WU2 507 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 PHACTR4Q8IZ21 702 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RCOR2Q8IZ40 523 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SYNE4Q8N205 404 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF280CQ8ND82 737 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ICA1LQ8NDH6 482 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SPIRE2Q8WWL2 714 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SGSM3Q96HU1 749 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 KCNK16Q96T55 309 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SEPT5Q99719 369 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC3Q9BQI4 270 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NAT9Q9BTE0 207 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 CINPQ9BW66 212 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 RPAP3Q9H6T3 665 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SENP2Q9HC62 589 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SLC25A13Q9UJS0 675 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 A0A1W2PQC6 194 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 EEF2KO00418 725 aaKnown RBP4.26□□□□□ -1.73
SCN3A-201ENST00000283254 NME3Q13232 169 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 DNAL1Q4LDG9 190 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF280DQ6N043 979 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 LRRC8EQ6NSJ5 796 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 SWSAP1Q6NVH7 229 aa4.26□□□□□ -1.73
SCN3A-201ENST00000283254 ERAP2Q6P179 960 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms