RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 PANK1Q8TE04 598 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 DIS3LQ8TF46 1054 aaKnown RBP5.16□□□□□ -1.58
CD44-202ENST00000278385 IP6K1Q92551 441 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 KIAA1191Q96A73 305 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 YTHDC1Q96MU7 727 aaKnown RBP5.16□□□□□ -1.58
CD44-202ENST00000278385 NT5C1BQ96P26 610 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 SGPP1Q9BX95 441 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 BRD9Q9H8M2 597 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 PCDH18Q9HCL0 1135 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 WASH6PQ9NQA3 447 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 C14orf119Q9NWQ9 140 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 DCAF16Q9NXF7 216 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 GGA3Q9NZ52 723 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 CEP72Q9P209 647 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 RABL2BQ9UNT1 228 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 SMG5Q9UPR3 1016 aaKnown RBP5.16□□□□□ -1.58
CD44-202ENST00000278385 HDAC5Q9UQL6 1122 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 SLIT3O75094 1523 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 A0A1W2PP64 1363 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 ANKRD36BQ8N2N9 1353 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 CCDC7Q96M83 1385 aa5.16□□□□□ -1.58
CD44-202ENST00000278385 TOPAZ1Q8N9V7 1692 aa5.15□□□□□ -1.58
CD44-202ENST00000278385 MARF1Q9Y4F3 1742 aaKnown RBP5.15□□□□□ -1.58
CD44-202ENST00000278385 FAM47E-STBD1D6RA91 191 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 FAM227AF5H4B4 570 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CBX4O00257 560 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 HGSO14964 777 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 FYB1O15117 783 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TMEM127O75204 238 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TUSC2O75896 110 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 DNTTP04053 509 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CSTBP04080 98 aaKnown RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 MED14OSP0DP75 135 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 MUTP22033 750 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 AMPHP49418 695 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 PAPOLAP51003 745 aaKnown RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 ARL4CP56559 192 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 SESN3P58005 492 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 GPR85P60893 370 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 LRRC32Q14392 662 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TESK1Q15569 626 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 EZH2Q15910 746 aaKnown RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 TAF12Q16514 161 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 ANO4Q32M45 955 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 FKBP15Q5T1M5 1219 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 IZUMO3Q5VZ72 239 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 ERICH6BQ5W0A0 696 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 FAM205BPQ63HN1 556 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CCDC73Q6ZRK6 1079 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CATSPER4Q7RTX7 472 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 LDHDQ86WU2 507 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TMTC1Q8IUR5 882 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TRIM48Q8IWZ4 208 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 KIAA0319LQ8IZA0 1049 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 SAMD14Q8IZD0 417 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 ESX1Q8N693 406 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CLRN3Q8NCR9 226 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 KREMEN2Q8NCW0 462 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 MSANTD4Q8NCY6 345 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.15□□□□□ -1.59
CD44-202ENST00000278385 SSH3Q8TE77 659 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TRAPPC12Q8WVT3 735 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 PTPRN2Q92932 1015 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TSPAN17Q96FV3 270 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 ZSCAN31Q96LW9 406 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 TEKT5Q96M29 485 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 TMEM120AQ9BXJ8 343 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 STK31Q9BXU1 1019 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CERS4Q9HA82 394 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 KCNK12Q9HB15 430 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 VPS45Q9NRW7 570 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 TMEFF2Q9UIK5 374 aaPredicted RBP5.15□□□□□ -1.59
CD44-202ENST00000278385 INVSQ9Y283 1065 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 PARD3Q8TEW0 1356 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 QRICH2Q9H0J4 1663 aa5.15□□□□□ -1.59
CD44-202ENST00000278385 CD163L1Q9NR16 1453 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 NRKQ7Z2Y5 1582 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 PLSCR1O15162 318 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 P4HA2O15460 535 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 AHCYL1O43865 530 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 BUB1BO60566 1050 aaPredicted RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 TBX18O95935 607 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 EFEMP2O95967 443 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 SOD2P04179 222 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 GNAT1P11488 350 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 IL2RBP14784 551 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 AKR1B1P15121 316 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 RPL17P18621 184 aaKnown RBP5.14□□□□□ -1.59
CD44-202ENST00000278385 TNFSF4P23510 183 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 FPR2P25090 351 aa5.14□□□□□ -1.59
CD44-202ENST00000278385 PIK3CBP42338 1070 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms