RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 TMEM40Q8WWA1 233 aa23.64■■□□□ 1.38
CCDC7-201ENST00000277657 C2CD2Q9Y426 696 aa23.64■■□□□ 1.38
CCDC7-201ENST00000277657 NT5DC4Q86YG4 428 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 CD302Q8IX05 232 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 RHOT2Q8IXI1 618 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 RBBP8NLQ8NC74 664 aaPredicted RBP23.64■■□□□ 1.37
CCDC7-201ENST00000277657 RABGGTAQ92696 567 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 FAXDC2Q96IV6 333 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 OSGEPQ9NPF4 335 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 SRRDQ9UH36 339 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 GTF2IRD1Q9UHL9 959 aa23.64■■□□□ 1.37
CCDC7-201ENST00000277657 NPTXRO95502 500 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CALCAP01258 141 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 PRKAR2AP13861 404 aaKnown RBP23.63■■□□□ 1.37
CCDC7-201ENST00000277657 ELNP15502 786 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CCND3P30281 292 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-201ENST00000277657 GPC5P78333 572 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CKAP4Q07065 602 aaKnown RBP23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CLEC16AQ2KHT3 1053 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 NBPF20Q3BBV1 942 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 COG1Q8WTW3 980 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CALR3Q96L12 384 aaKnown RBP23.63■■□□□ 1.37
CCDC7-201ENST00000277657 MMS19Q96T76 1030 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 CCDC94Q9BW85 323 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-201ENST00000277657 XPNPEP3Q9NQH7 507 aa23.63■■□□□ 1.37
CCDC7-201ENST00000277657 RALGAPA2Q2PPJ7 1873 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 TRPA1O75762 1119 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 ASPAP45381 313 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 TMEM132DQ14C87 1099 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 TEX35Q5T0J7 233 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 ACAD10Q6JQN1 1059 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 SYCE1Q8N0S2 351 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 KLHDC9Q8NEP7 349 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 CAPZA3Q96KX2 299 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 PLEKHA5Q9HAU0 1116 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 CLSTN1O94985 981 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 UNGP13051 313 aaPredicted RBP23.62■■□□□ 1.37
CCDC7-201ENST00000277657 ZNF572Q7Z3I7 529 aaPredicted RBP23.62■■□□□ 1.37
CCDC7-201ENST00000277657 RPGRIP1Q96KN7 1286 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 EIF2AQ9BY44 585 aaKnown RBP23.62■■□□□ 1.37
CCDC7-201ENST00000277657 VRTNQ9H8Y1 702 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 COG5Q9UP83 839 aa23.62■■□□□ 1.37
CCDC7-201ENST00000277657 PDE2AO00408 941 aaPredicted RBP23.61■■□□□ 1.37
CCDC7-201ENST00000277657 CST5P28325 142 aaPredicted RBP23.61■■□□□ 1.37
CCDC7-201ENST00000277657 HOXD10P28358 340 aa23.61■■□□□ 1.37
CCDC7-201ENST00000277657 MAP3K21Q5TCX8 1036 aa23.61■■□□□ 1.37
CCDC7-201ENST00000277657 CCSAPQ6IQ19 270 aaPredicted RBP23.61■■□□□ 1.37
CCDC7-201ENST00000277657 ABCB6Q9NP58 842 aa23.61■■□□□ 1.37
CCDC7-201ENST00000277657 CISHQ9NSE2 258 aa23.61■■□□□ 1.37
CCDC7-201ENST00000277657 STXBP5LQ9Y2K9 1186 aa23.61■■□□□ 1.37
CCDC7-201ENST00000277657 BUB1BO60566 1050 aaPredicted RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 MTA2O94776 668 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 CYP1A1P04798 512 aaPredicted RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 ITGB3P05106 788 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 KRT19P08727 400 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 GNA15P30679 374 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 ATICP31939 592 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 MAP2K2P36507 400 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 GPR161Q8N6U8 529 aaKnown RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 CD99L2Q8TCZ2 262 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 GOLPH3Q9H4A6 298 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 GTF3C4Q9UKN8 822 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 DERAQ9Y315 318 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 HTTP42858 3142 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 CYP1A2P05177 515 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 CXCR5P32302 372 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 GDF6Q6KF10 455 aaPredicted RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 PSMB7Q99436 277 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 BCO2Q9BYV7 579 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 CELF4Q9BZC1 486 aaKnown RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 SNTG2Q9NY99 539 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 ITGA11Q9UKX5 1188 aa23.6■■□□□ 1.37
CCDC7-201ENST00000277657 PACSIN2Q9UNF0 486 aaPredicted RBP23.6■■□□□ 1.37
CCDC7-201ENST00000277657 FAM170AA1A519 330 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 KIF4AO95239 1232 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 HMGCRP04035 888 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 ZSCAN20P17040 1043 aaPredicted RBP23.59■■□□□ 1.37
CCDC7-201ENST00000277657 RBM10P98175 930 aaKnown RBP23.59■■□□□ 1.37
CCDC7-201ENST00000277657 RPS6KA1Q15418 735 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 ZNF667Q5HYK9 610 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 TRIM72Q6ZMU5 477 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 DAAM2Q86T65 1068 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 NT5DC3Q86UY8 548 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 SESTD1Q86VW0 696 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 SNX27Q96L92 541 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 PIN4Q9Y237 131 aaKnown RBP23.59■■□□□ 1.37
CCDC7-201ENST00000277657 THSD7BQ9C0I4 1608 aa23.59■■□□□ 1.37
CCDC7-201ENST00000277657 CES2O00748 559 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 ASGR1P07306 291 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 YWHAEP62258 255 aaKnown RBP23.58■■□□□ 1.37
CCDC7-201ENST00000277657 MRPS6P82932 125 aaKnown RBP23.58■■□□□ 1.37
CCDC7-201ENST00000277657 CENPCQ03188 943 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 ITIH3Q06033 890 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 KCNA10Q16322 511 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 TMEM130Q8N3G9 435 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 CAGE1Q8TC20 777 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 RNF14Q9UBS8 474 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 TRIP11Q15643 1979 aa23.58■■□□□ 1.37
CCDC7-201ENST00000277657 STAU1O95793 577 aaKnown RBP23.58■■□□□ 1.36
CCDC7-201ENST00000277657 WEE2P0C1S8 567 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms