RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PTGDRQ13258 359 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 MRPL58Q14197 206 aaKnown RBP9.83□□□□□ -0.84
TPM3-201ENST00000271850 SEZ6Q53EL9 994 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 LIN9Q5TKA1 542 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 SLC8B1Q6J4K2 584 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 RINT1Q6NUQ1 792 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 ELMSAN1Q6PJG2 1045 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 C1orf210Q8IVY1 113 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 SUMF1Q8NBK3 374 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 ERMNQ8TAM6 284 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 ADPGKQ9BRR6 497 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 LLPHQ9BRT6 129 aaKnown RBP9.83□□□□□ -0.84
TPM3-201ENST00000271850 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 LRWD1Q9UFC0 647 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 SIT1Q9Y3P8 196 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 MIA3Q5JRA6 1907 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 F5P12259 2224 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 ZFHX4Q86UP3 3567 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 KANSL1LA0AUZ9 987 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 ARHGEF37A1IGU5 675 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 SFI1A8K8P3 1242 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 PODXLO00592 558 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 KCNE1P15382 129 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 TARSP26639 723 aaKnown RBP9.82□□□□□ -0.84
TPM3-201ENST00000271850 TRAPPC10P48553 1259 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 EFNA5P52803 228 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 ELAVL2Q12926 359 aaKnown RBP9.82□□□□□ -0.84
TPM3-201ENST00000271850 PPP2R5AQ15172 486 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 MLF2Q15773 248 aaPredicted RBP9.82□□□□□ -0.84
TPM3-201ENST00000271850 UVSSAQ2YD98 709 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 SLC10A6Q3KNW5 377 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 ZNF568Q3ZCX4 644 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 PABPC1LQ4VXU2 614 aaKnown RBP9.82□□□□□ -0.84
TPM3-201ENST00000271850 SLC44A4Q53GD3 710 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 TANGO2Q6ICL3 276 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 DCLK2Q8N568 766 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 KIFAP3Q92845 792 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 RMDN1Q96DB5 314 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 TMEM134Q9H6X4 195 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 PPP4R2Q9NY27 417 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 TUBGCP4Q9UGJ1 667 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 POLIQ9UNA4 740 aa9.82□□□□□ -0.84
TPM3-201ENST00000271850 ZFP37Q9Y6Q3 630 aaPredicted RBP9.82□□□□□ -0.84
TPM3-201ENST00000271850 CCDC169A6NNP5 214 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 K7ERI5 159 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 SLC16A4O15374 487 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 FAM189A1O60320 539 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
TPM3-201ENST00000271850 LMNAP02545 664 aaKnown RBP9.81□□□□□ -0.84
TPM3-201ENST00000271850 COPS2P61201 443 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 PDIA5Q14554 519 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
TPM3-201ENST00000271850 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 C8orf34Q49A92 452 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 WDR44Q5JSH3 913 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 HYIQ5T013 277 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 TMEM161BQ8NDZ6 487 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 NELL1Q92832 810 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 MCRS1Q96EZ8 462 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 IFT74Q96LB3 600 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 ZSWIM3Q96MP5 696 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 UROC1Q96N76 676 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 LTB4R2Q9NPC1 389 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 AVENQ9NQS1 362 aaPredicted RBP9.81□□□□□ -0.84
TPM3-201ENST00000271850 CEP72Q9P209 647 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 KCNH3Q9ULD8 1083 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 CITO14578 2027 aa9.81□□□□□ -0.84
TPM3-201ENST00000271850 NPHP3-ACAD11A0A0J9YXS1 232 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 PPEF2O14830 753 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 XYLBO75191 536 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ECI2O75521 394 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 MAPTP10636 758 aaKnown RBP9.8□□□□□ -0.84
TPM3-201ENST00000271850 MCF2P10911 925 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 TDGF1P13385 188 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ATF2P15336 505 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ID4P47928 161 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 SLC12A3P55017 1021 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 SPAG1Q07617 926 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 RAD51AP2Q09MP3 1159 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 GRM2Q14416 872 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ARSHQ5FYA8 562 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 FAM78AQ5JUQ0 283 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ZBTB41Q5SVQ8 909 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 MPZL3Q6UWV2 235 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ANKS3Q6ZW76 656 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 MTSS1LQ765P7 747 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 TCEAL8Q8IYN2 117 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 ZNF461Q8TAF7 563 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 CLDN23Q96B33 292 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 RSPRY1Q96DX4 576 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 NTPCRQ9BSD7 190 aaKnown RBP9.8□□□□□ -0.84
TPM3-201ENST00000271850 LRRC3Q9BY71 257 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms