RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CD101Q93033 1021 aa17.78■□□□□ 0.44
CCDC40-201ENST00000269318 CYFIP2Q96F07 1278 aa17.78■□□□□ 0.44
CCDC40-201ENST00000269318 ANKRD36BP1Q96IX9 119 aa17.78■□□□□ 0.44
CCDC40-201ENST00000269318 AVENQ9NQS1 362 aaPredicted RBP17.78■□□□□ 0.44
CCDC40-201ENST00000269318 SETD4Q9NVD3 440 aa17.78■□□□□ 0.44
CCDC40-201ENST00000269318 CNOT8Q9UFF9 292 aaKnown RBP17.78■□□□□ 0.44
CCDC40-201ENST00000269318 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 TNNC2P02585 160 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 SLC10A3P09131 477 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 COMTP21964 271 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 TRPC3Q13507 836 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 MESDQ14696 234 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 CCL14Q16627 93 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 NAA35Q5VZE5 725 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 SMYD5Q6GMV2 418 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 GSPT2Q8IYD1 628 aaKnown RBP17.77■□□□□ 0.44
CCDC40-201ENST00000269318 AENQ8WTP8 325 aaKnown RBP17.77■□□□□ 0.44
CCDC40-201ENST00000269318 CPA5Q8WXQ8 436 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 HINFPQ9BQA5 517 aa17.77■□□□□ 0.44
CCDC40-201ENST00000269318 LACTBL1A8MY62 500 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 GLI1P08151 1106 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 NFICP08651 508 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 MYBL1P10243 752 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 ASPAP45381 313 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 NOMO3P69849 1222 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 MON1BQ7L1V2 547 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 TLK2Q86UE8 772 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 KRT35Q92764 455 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.43
CCDC40-201ENST00000269318 BTBD6Q96KE9 485 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 GDF3Q9NR23 364 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 SIX4Q9UIU6 781 aa17.77■□□□□ 0.43
CCDC40-201ENST00000269318 A0A1B0GUA9 196 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 TMEM110-MUSTN1A8MSY1 372 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 CCDC188H7C350 402 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 CLSTN1O94985 981 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 CYP2C19P33261 490 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 NSFP46459 744 aaKnown RBP17.76■□□□□ 0.43
CCDC40-201ENST00000269318 PEX5P50542 639 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 ZNF699Q32M78 642 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 C1orf127Q8N9H9 656 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 CXorf38Q8TB03 319 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 TRIM11Q96F44 468 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 RNPC3Q96LT9 517 aaKnown RBP17.76■□□□□ 0.43
CCDC40-201ENST00000269318 AP1M1Q9BXS5 423 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 ADAMTS10Q9H324 1103 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 CISHQ9NSE2 258 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 GJD2Q9UKL4 321 aa17.76■□□□□ 0.43
CCDC40-201ENST00000269318 NRCAMQ92823 1304 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 MBLAC1A4D2B0 266 aaPredicted RBP17.75■□□□□ 0.43
CCDC40-201ENST00000269318 RAD51CO43502 376 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 ITGA4P13612 1032 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 RRM1P23921 792 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 MARCKSL1P49006 195 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 INHBEP58166 350 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 KYAT1Q16773 422 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 SLC10A6Q3KNW5 377 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 WNT8AQ9H1J5 351 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 ASB7Q9H672 318 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 KRIT1O00522 736 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 THAP12O43422 761 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 HEXIM1O94992 359 aaKnown RBP17.75■□□□□ 0.43
CCDC40-201ENST00000269318 FGGP02679 453 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 RGS2P41220 211 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
CCDC40-201ENST00000269318 JADE1Q6IE81 842 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 PHF13Q86YI8 300 aaPredicted RBP17.75■□□□□ 0.43
CCDC40-201ENST00000269318 CPNE8Q86YQ8 564 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 PASD1Q8IV76 773 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 KLHL7Q8IXQ5 586 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 SCLT1Q96NL6 688 aa17.75■□□□□ 0.43
CCDC40-201ENST00000269318 MROH7Q68CQ1 1323 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 PASKQ96RG2 1323 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 FAM155AB1AL88 458 aaPredicted RBP17.74■□□□□ 0.43
CCDC40-201ENST00000269318 GPR32O75388 356 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 ERLIN2O94905 339 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 CD58P19256 250 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 CYP2B6P20813 491 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 CTNNA2P26232 953 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 PTP4A2Q12974 167 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 ZNF211Q13398 564 aaPredicted RBP17.74■□□□□ 0.43
CCDC40-201ENST00000269318 SMC1AQ14683 1233 aaKnown RBP17.74■□□□□ 0.43
CCDC40-201ENST00000269318 KIZQ2M2Z5 673 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 IFT20Q8IY31 132 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 VCPIP1Q96JH7 1222 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 APBA2Q99767 749 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 VIPAS39Q9H9C1 493 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
CCDC40-201ENST00000269318 ZSCAN5CA6NGD5 496 aaPredicted RBP17.73■□□□□ 0.43
CCDC40-201ENST00000269318 HAS3O00219 553 aa17.73■□□□□ 0.43
CCDC40-201ENST00000269318 WEE2P0C1S8 567 aa17.73■□□□□ 0.43
CCDC40-201ENST00000269318 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
CCDC40-201ENST00000269318 ADAM17P78536 824 aa17.73■□□□□ 0.43
CCDC40-201ENST00000269318 HIC1Q14526 733 aa17.73■□□□□ 0.43
CCDC40-201ENST00000269318 MFSD10Q14728 455 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms