RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 LOC100653049A0A140TA62 436 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 KRT34O76011 436 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 CALB1P05937 261 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 PBX1P40424 430 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 BAG6P46379 1132 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 IRF2BP1Q8IU81 584 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 AGAP11Q8TF27 550 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 MED10Q9BTT4 135 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 RPF1Q9H9Y2 349 aaKnown RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 GDF3Q9NR23 364 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SCAF8Q9UPN6 1271 aaKnown RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SIK3Q9Y2K2 1263 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ATP6V1B1P15313 513 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SURF1Q15526 300 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 CYP2W1Q8TAV3 490 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 CCDC138Q96M89 665 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 MTRQ99707 1265 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 WWP1Q9H0M0 922 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 STXBP2Q15833 593 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 KAT2BQ92831 832 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 WRNIP1Q96S55 665 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ATRNO75882 1429 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 NFAT5O94916 1531 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 RARGP13631 454 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 GRM1Q13255 1194 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-201ENST00000267199 SULF1Q8IWU6 871 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 ATXN7L3BQ96GX2 97 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 HEY2Q9UBP5 337 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 CHMP2BQ9UQN3 213 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 UBE4BO95155 1302 aa12.18□□□□□ -0.46
VPS33A-201ENST00000267199 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-201ENST00000267199 SREBF1P36956 1147 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 KCNJ2P63252 427 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-201ENST00000267199 MOXD1Q6UVY6 613 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 SERPINB12Q96P63 405 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 RIT2Q99578 217 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 KLC2Q9H0B6 622 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 DDTLA6NHG4 134 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-201ENST00000267199 KRT4P19013 534 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 STX1BP61266 288 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 ZSWIM1Q9BR11 485 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 KIFC3Q9BVG8 833 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 PSMC3IPQ9P2W1 217 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-201ENST00000267199 LZTS1Q9Y250 596 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 RALAP11233 206 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 CNGA3Q16281 694 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 MIIPQ5JXC2 388 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 GRAMD4Q6IC98 578 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
VPS33A-201ENST00000267199 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-201ENST00000267199 SNUPNO95149 360 aaKnown RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 GHRP10912 638 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 GYS1P13807 737 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 TMEM119Q4V9L6 283 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 TTC13Q8NBP0 860 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 TATDN2Q93075 761 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ACSF2Q96CM8 615 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 CBWD1Q9BRT8 395 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF302Q9NR11 478 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ARHGAP10A1A4S6 786 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 EEF1DP29692 281 aaKnown RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 SHMT1P34896 483 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 SLC12A1Q13621 1099 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 C16orf87Q6PH81 154 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 AP1G2O75843 785 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 ARP10275 920 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 MSL3Q8N5Y2 521 aaKnown RBP12.16□□□□□ -0.46
VPS33A-201ENST00000267199 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 TMEM143Q96AN5 459 aa12.16□□□□□ -0.46
VPS33A-201ENST00000267199 SDCCAG3Q96C92 435 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms