RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 NME8Q8N427 588 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 LRRC57Q8N9N7 239 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 OSGEPQ9NPF4 335 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CNTN6Q9UQ52 1028 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 ITGB3P05106 788 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 HOXD10P28358 340 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 AXLP30530 894 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 GNA15P30679 374 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CXCR5P32302 372 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CRYBB1P53674 252 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 SCARA5Q6ZMJ2 495 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 UBR7Q8N806 425 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CAGE1Q8TC20 777 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 COG1Q8WTW3 980 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 PACSIN2Q9UNF0 486 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 HMGCRP04035 888 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CD58P19256 250 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 ASPAP45381 313 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 DNA2P51530 1060 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 GPC5P78333 572 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 DAAM2Q86T65 1068 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 TAF4BQ92750 862 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 MMS19Q96T76 1030 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 SNTG2Q9NY99 539 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 NXF1Q9UBU9 619 aaKnown RBP12.38□□□□□ -0.43
SCAF11-201ENST00000266589 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
SCAF11-201ENST00000266589 TRIP11Q15643 1979 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 ASGR1P07306 291 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF132P52740 706 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 KCNA10Q16322 511 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 CREG2Q8IUH2 290 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 CD302Q8IX05 232 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 SYCE1Q8N0S2 351 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 CELF4Q9BZC1 486 aaKnown RBP12.37□□□□□ -0.43
SCAF11-201ENST00000266589 PDCL3Q9H2J4 239 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 POLIQ9UNA4 740 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 COG5Q9UP83 839 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 HES2Q9Y543 173 aa12.37□□□□□ -0.43
SCAF11-201ENST00000266589 M0QZ92 97 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 THAP12O43422 761 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 WEE2P0C1S8 567 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 UNGP13051 313 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 MAP2K2P36507 400 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 VEGFBP49765 207 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 GUCY2FP51841 1108 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 YARSP54577 528 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 PTPROQ16827 1216 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 PEX26Q7Z412 305 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 SLFN11Q7Z7L1 901 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 NT5DC4Q86YG4 428 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 KLHDC9Q8NEP7 349 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 CENPFP49454 3210 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 KIF4AO95239 1232 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ATICP31939 592 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
SCAF11-201ENST00000266589 RPS6KA1Q15418 735 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 SNX27Q96L92 541 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 CXCL16Q9H2A7 254 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 DPP3Q9NY33 737 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 ITGA11Q9UKX5 1188 aa12.36□□□□□ -0.43
SCAF11-201ENST00000266589 AGAP1Q9UPQ3 857 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms