RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 CYP11B2P19099 503 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 BASP1P80723 227 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 VGLL4Q14135 290 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 IZUMO3Q5VZ72 239 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 TTC1Q99614 292 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 GLTPD2A6NH11 291 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 FAM47DPA6NHR8 397 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 ITIH2P19823 946 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 RANBP1P43487 201 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 HSD17B4P51659 736 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 DYNLT1P63172 113 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 TFDP1Q14186 410 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 IL17AQ16552 155 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 HYIQ5T013 277 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 HAS1Q92839 578 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 TATDN2Q93075 761 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 NUF2Q9BZD4 464 aa12.21□□□□□ -0.46
CLSTN3-201ENST00000266546 GOLGA8IPA6NC78 632 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 GOLGA8JA6NMD2 632 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ADM5C9JUS6 153 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 MED24O75448 989 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 DNAJC8O75937 253 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 GRAMD1BQ3KR37 738 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 CEP120Q8N960 986 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 FAM81BQ96LP2 452 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 PARK7Q99497 189 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 TRABDQ9H4I3 376 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 MAD1L1Q9Y6D9 718 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 PEX3P56589 373 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 FKBP1BP68106 108 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 TTLL4Q14679 1199 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ARHGAP18Q8N392 663 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ANKRD31Q8N7Z5 1873 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ABTB1Q969K4 478 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 NAF1Q96HR8 494 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 MBOAT7Q96N66 472 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 SNRPFP62306 86 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 CUL3Q13618 768 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 XKR3Q5GH77 459 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 EIF1ADQ8N9N8 165 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ZNF302Q9NR11 478 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
CLSTN3-201ENST00000266546 SPECC1L-ADORA2AF8WAN1 911 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SLC16A3O15427 465 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 CLDN3O15551 220 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 PGM5Q15124 567 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 C1orf146Q5VVC0 180 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 BSPRYQ5W0U4 402 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 OTOP1Q7RTM1 612 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 HIPK4Q8NE63 616 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 REEP2Q9BRK0 252 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 UNC45AQ9H3U1 944 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 AGO4Q9HCK5 861 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 FANCGO15287 622 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 DGAT1O75907 488 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RNF8O76064 485 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ARP10275 920 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 MARK3P27448 753 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SPOUT1Q5T280 376 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RFX8Q6ZV50 586 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 DNAAF5Q86Y56 855 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 IRF2BP1Q8IU81 584 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 NME8Q8N427 588 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 XXYLT1Q8NBI6 393 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ATL2Q8NHH9 583 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 HAUS1Q96CS2 278 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SERPINB12Q96P63 405 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 NDE1Q9NXR1 346 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ATXN2Q99700 1313 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RARGP13631 454 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 COMTP21964 271 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 POLR2BP30876 1174 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms