RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 DEFB118Q96PH6 123 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 PTPN22Q9Y2R2 807 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 RFC5P40937 340 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 LAMTOR4Q0VGL1 99 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 BIRC2Q13490 618 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 NBPF20Q3BBV1 942 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 MARCH8Q5T0T0 291 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 CENPPQ6IPU0 288 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 ZSWIM2Q8NEG5 633 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 LUC7LQ9NQ29 371 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 GNRH1P01148 92 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 NR2F2P24468 414 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 KIZQ2M2Z5 673 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 XPO6Q96QU8 1125 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 GOLGA8IPA6NC78 632 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 GOLGA8JA6NMD2 632 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 INO80B-WBP1J3KQ70 363 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 ANP32DO95626 131 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 HSPA1AP0DMV8 641 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 HSPA1BP0DMV9 641 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 FGFR4P22455 802 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CASP4P49662 377 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 ADAM9Q13443 819 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 ERMARDQ5T6L9 678 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 DDX42Q86XP3 938 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CENPTQ96BT3 561 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 TSG101Q99816 390 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 INO80BQ9C086 356 aaPredicted RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 NEUROG2Q9H2A3 272 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SEL1LQ9UBV2 794 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SLC12A4Q9UP95 1085 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 DCDC2CA8MYV0 355 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 CES2O00748 559 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 ARL2P36404 184 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 ZNF484Q5JVG2 852 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 BZW1Q7L1Q6 419 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 TCP11Q8WWU5 503 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 TAF4BQ92750 862 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
PRPF6-201ENST00000266079 SPATS2LQ9NUQ6 558 aaKnown RBP13.5□□□□□ -0.25
PRPF6-201ENST00000266079 A0A087WZ62 844 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 CLTAP09496 248 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 CYP2C9P11712 490 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 TMEM132AQ24JP5 1023 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 COBLL1Q53SF7 1204 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 FDXACB1Q9BRP7 624 aaPredicted RBP13.49□□□□□ -0.25
PRPF6-201ENST00000266079 CBWD1Q9BRT8 395 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF6-201ENST00000266079 MINDY3Q9H8M7 445 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 PCDH10Q9P2E7 1040 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 ANKFY1Q9P2R3 1169 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 CFAP73A6NFT4 308 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 K7ERI5 159 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 EDN1P05305 212 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 NLRP11P59045 1033 aaKnown RBP13.49□□□□□ -0.25
PRPF6-201ENST00000266079 KRT71Q3SY84 523 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 LHX8Q68G74 356 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
PRPF6-201ENST00000266079 CTSHP09668 335 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 IER5Q5VY09 327 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 STXBP4Q6ZWJ1 553 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 RNF180Q86T96 592 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 SAAL1Q96ER3 474 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms