RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 KCNA3P22001 575 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 GCLMP48507 274 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 VPS41P49754 854 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 POLE2P56282 527 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 PPP3CAQ08209 521 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 KSR1Q8IVT5 923 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 ACCSQ96QU6 501 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 STRA6Q9BX79 667 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 CADM1Q9BY67 442 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 ANGPTL2Q9UKU9 493 aa13.13□□□□□ -0.31
CHMP2B-201ENST00000263780 POC1B-GALNT4F8VUJ3 575 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 GSC2O15499 205 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 TJP3O95049 919 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SESN3P58005 492 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 LAMB3Q13751 1172 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 ZC3H18Q86VM9 953 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 XXYLT1Q8NBI6 393 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 MKL1Q969V6 931 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 TRIM55Q9BYV6 548 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 VCX3BQ9H321 246 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PSMC3IPQ9P2W1 217 aaPredicted RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 CAPN9O14815 690 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PSTPIP1O43586 416 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 UPP2O95045 317 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PSMG1O95456 288 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SHMT1P34896 483 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 KRT72Q14CN4 511 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 RNF220Q5VTB9 566 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SLFN13Q68D06 897 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PPM1KQ8N3J5 372 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 PPP1R12CQ9BZL4 782 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 NPHS2Q9NP85 383 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 DAGLAQ9Y4D2 1042 aa13.12□□□□□ -0.31
CHMP2B-201ENST00000263780 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 ARHGEF35A5YM69 484 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 TYROBPO43914 113 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 DNAJC6O75061 913 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 RNF8O76064 485 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PLS3P13797 630 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 POLD1P28340 1107 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PRELPP51888 382 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 DLG4P78352 724 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 UCMAQ8WVF2 138 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 GATA6Q92908 595 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PWWP2AQ96N64 755 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 SUGT1Q9Y2Z0 365 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 F5H6K3 240 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 TM9SF1O15321 606 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 UFL1O94874 794 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 KLRC2P26717 231 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 GCAP28676 217 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 ZBTB16Q05516 673 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 SLC1A5Q15758 541 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 P3H1Q32P28 736 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 RHOT1Q8IXI2 618 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 MIPEPQ99797 713 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 VPS11Q9H270 941 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 IL1RAPL1Q9NZN1 696 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
CHMP2B-201ENST00000263780 FAM196BA6NMK8 535 aa13.1□□□□□ -0.31
CHMP2B-201ENST00000263780 K7ENM7 598 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms