RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TUSC3Q13454 348 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 IQCB1Q15051 598 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 KLHL10Q6JEL2 608 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 TMEM173Q86WV6 379 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 CBWD2Q8IUF1 395 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 BCL7CQ8WUZ0 217 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 P2RX5Q93086 422 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 PAAF1Q9BRP4 392 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 DMAC2Q9NW81 257 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 CHD7Q9P2D1 2997 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 CASTOR2A6NHX0 329 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 F8W810 466 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 NRP1O14786 923 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 GRM6O15303 877 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 NR3C1P04150 777 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 ITGB1P05556 798 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 RPL13P26373 211 aaKnown RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 OR1G1P47890 313 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 GPM6BQ13491 265 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 ADGRE1Q14246 886 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 NFIL3Q16649 462 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 SLC9A9Q8IVB4 645 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 XXYLT1Q8NBI6 393 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 TMEM174Q8WUU8 243 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 RBAKQ9NYW8 714 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 TUBGCP4Q9UGJ1 667 aa12.54□□□□□ -0.4
PFDN1-201ENST00000261813 PRG3Q9Y2Y8 225 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
PFDN1-201ENST00000261813 FGF18O76093 207 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 ALDH2P05091 517 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 NFICP08651 508 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 CASP4P49662 377 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 PLCB3Q01970 1234 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 ZBTB6Q15916 424 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 SNRNP35Q16560 246 aaKnown RBP12.53□□□□□ -0.4
PFDN1-201ENST00000261813 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 LUZP1Q86V48 1076 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 CD302Q8IX05 232 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
PFDN1-201ENST00000261813 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 PPM1EQ8WY54 764 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 IGSF21Q96ID5 467 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 ASB7Q9H672 318 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
PFDN1-201ENST00000261813 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
PFDN1-201ENST00000261813 CITO14578 2027 aa12.52□□□□□ -0.4
PFDN1-201ENST00000261813 PDCD11Q14690 1871 aaKnown RBP12.52□□□□□ -0.4
PFDN1-201ENST00000261813 TTC28Q96AY4 2481 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 TRIM49BA6NDI0 452 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 ZNF233A6NK53 670 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 EXOC3O60645 756 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 IL18RAPO95256 599 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 GNA14O95837 355 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.41
PFDN1-201ENST00000261813 IGFBP6P24592 240 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-201ENST00000261813 DNAJB1P25685 340 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 PPM1AP35813 382 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 CLCNKBP51801 687 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 GUCY2FP51841 1108 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 FKBP3Q00688 224 aaKnown RBP12.52□□□□□ -0.41
PFDN1-201ENST00000261813 KCNC4Q03721 635 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 CAMK1Q14012 370 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 MYBPC2Q14324 1141 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 POF1BQ8WVV4 589 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 VN1R3Q9BXE9 311 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 THAP9Q9H5L6 903 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
PFDN1-201ENST00000261813 MAGEC2Q9UBF1 373 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-201ENST00000261813 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms