RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 INPP5BP32019 993 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PDAP1Q13442 181 aaKnown RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PKN3Q6P5Z2 889 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 SENP7Q9BQF6 1050 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 AP1M1Q9BXS5 423 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 INTS9Q9NV88 658 aaKnown RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 VTNP04004 478 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 NCAM1P13591 858 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 OAZ1P54368 228 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 GRIK4Q16099 956 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 OTUB1Q96FW1 271 aaPredicted RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 VPS11Q9H270 941 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 ABHD16BQ9H3Z7 469 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 TEKT2Q9UIF3 430 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 TMX2Q9Y320 296 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PKP3Q9Y446 797 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 CCT5P48643 541 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 GPR63Q9BZJ6 419 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ZNF609O15014 1411 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 LRRC53A6NM62 1247 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PP2D1A8MPX8 630 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ACVR2BQ13705 512 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 VSTM4Q8IW00 320 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 RBBP8NLQ8NC74 664 aaPredicted RBP14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 AGPAT1Q99943 283 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PHF20Q9BVI0 1012 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PLA2G4CQ9UP65 541 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 TRPV2Q9Y5S1 764 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 CYB561D2O14569 222 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 NDUFS3O75489 264 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 LHX1P48742 406 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PSEN2P49810 448 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ACAD11Q709F0 780 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 RTN2O75298 545 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ASS1P00966 412 aaKnown RBP14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 ITGB3P05106 788 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 KLRK1P26718 216 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 MFSD4BQ5TF39 518 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 GPATCH11Q8N954 259 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 KIFC3Q9BVG8 833 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 EML4Q9HC35 981 aaKnown RBP14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 AIPL1Q9NZN9 384 aa14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 UXTQ9UBK9 157 aaPredicted RBP14.29□□□□□ -0.12
PDGFRB-201ENST00000261799 DHX9Q08211 1270 aaKnown RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 KRT35Q92764 455 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 KIAA1683Q9H0B3 1180 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CYP4F11Q9HBI6 524 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CYP26A1O43174 497 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TLR2O60603 784 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CLCN1P35523 988 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 GNGT1P63211 74 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CUL4AQ13619 759 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 ZBTB41Q5SVQ8 909 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 MPZL3Q6UWV2 235 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 PPWD1Q96BP3 646 aaKnown RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TUBB6Q9BUF5 446 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 FAM96AQ9H5X1 160 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 KLHL11Q9NVR0 708 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SOWAHDA6NJG2 315 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SUN1O94901 812 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CYP2C8P10632 490 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TTC31Q49AM3 519 aaPredicted RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TAF2Q6P1X5 1199 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 GMCL1Q96IK5 515 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SERPINI1Q99574 410 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SYNDIG1LA6NDD5 238 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 NDUFS2O75306 463 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 MUTP22033 750 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 IQSEC1Q6DN90 963 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SNX31Q8N9S9 440 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 MIPOL1Q8TD10 442 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 MTBPQ96DY7 904 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 TSPAN17Q96FV3 270 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 POLR3CQ9BUI4 534 aaPredicted RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 NIF3L1Q9GZT8 377 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 ZMYND12Q9H0C1 365 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CDC23Q9UJX2 597 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 ATP9BO43861 1147 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 NAMPTP43490 491 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SLC45A4Q5BKX6 768 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CRLF3Q8IUI8 442 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 GBP7Q8N8V2 638 aaPredicted RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 SH2D3AQ9BRG2 576 aa14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.28□□□□□ -0.12
PDGFRB-201ENST00000261799 KLRC1P26715 233 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms