RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 SEL1LQ9UBV2 794 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 SOX6P35712 828 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 TRIP4Q15650 581 aaPredicted RBP7.51□□□□□ -1.21
HERC2-201ENST00000261609 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 PCP4L1A6NKN8 68 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 ALOX12P18054 663 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 HADHAP40939 763 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 CDKL3Q8IVW4 592 aaPredicted RBP7.51□□□□□ -1.21
HERC2-201ENST00000261609 STK33Q9BYT3 514 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
HERC2-201ENST00000261609 MPP6Q9NZW5 540 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 NEDD4P46934 1319 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 STX7O15400 261 aaKnown RBP7.51□□□□□ -1.21
HERC2-201ENST00000261609 SLC16A3O15427 465 aaKnown RBP7.51□□□□□ -1.21
HERC2-201ENST00000261609 RASA2Q15283 850 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 ZNF699Q32M78 642 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 RNF139Q8WU17 664 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 EHD4Q9H223 541 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 EURLQ9NYK6 297 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 GJA3Q9Y6H8 435 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 AP3B2Q13367 1082 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 ARMC3Q5W041 872 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 ARMCX2Q7L311 632 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 TMEM79Q9BSE2 394 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 SOX13Q9UN79 622 aa7.51□□□□□ -1.21
HERC2-201ENST00000261609 NEMP1O14524 444 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 TBC1D10BQ4KMP7 808 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 ZHX2Q9Y6X8 837 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 ZBTB24O43167 697 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 NIM1KQ8IY84 436 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 GGA2Q9UJY4 613 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 TMCO1Q9UM00 188 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PCDHGA3Q9Y5H0 932 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 PRELPP51888 382 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 HSPA2P54652 639 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CDC26Q8NHZ8 85 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 DCAF4Q8WV16 495 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 KIAA1586Q9HCI6 787 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 PLEKHG3A1L390 1219 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 GOLGA8JA6NMD2 632 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 MAFGO15525 162 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 GYPCP04921 128 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 SGSM1Q2NKQ1 1148 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PPP6R3Q5H9R7 873 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 ARMC4Q5T2S8 1044 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 HEATR6Q6AI08 1181 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 SETD3Q86TU7 594 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 COPG2Q9UBF2 871 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 HBS1LQ9Y450 684 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 REREQ9P2R6 1566 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 ADGRA3Q8IWK6 1321 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CCT3P49368 545 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 USP11P51784 963 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 IMPG1Q17R60 797 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 TNIP2Q8NFZ5 429 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PARD3BQ8TEW8 1205 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 FAM193BQ96PV7 902 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 EPS8L2Q9H6S3 715 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 COMMD3-BMI1R4GMX3 469 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PSMC6P62333 389 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PLEKHM3Q6ZWE6 761 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 MARCH10Q8NA82 808 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 PAPD7Q5XG87 772 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 ITPRIPL1Q6GPH6 555 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 GINS4Q9BRT9 223 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 EXOSC4Q9NPD3 245 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 RWDD3Q9Y3V2 267 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 POTEMA6NI47 508 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PRLRP16471 622 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CCDC142Q17RM4 750 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 MB21D2Q8IYB1 491 aaPredicted RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 BHMT2Q9H2M3 363 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CLEC11AQ9Y240 323 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CPSF1Q10570 1443 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 MYO1GB0I1T2 1018 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 SPAG6O75602 509 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 DPYDQ12882 1025 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PASD1Q8IV76 773 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 NOL6Q9H6R4 1146 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 KLHL20Q9Y2M5 609 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 CLASP2O75122 1294 aaKnown RBP7.5□□□□□ -1.21
HERC2-201ENST00000261609 TRIM69Q86WT6 500 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 DGKHQ86XP1 1220 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 C7orf31Q8N865 590 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 C17orf80Q9BSJ5 609 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PARVAQ9NVD7 372 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 H0YIN7 160 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 KCNJ2P63252 427 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 KRT72Q14CN4 511 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 ALX1Q15699 326 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 PRUNE1Q86TP1 453 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 FANCEQ9HB96 536 aa7.5□□□□□ -1.21
HERC2-201ENST00000261609 F5H423 210 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms