RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 PSMC4P43686 418 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 PDIA2Q13087 525 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 CKAP2Q8WWK9 683 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 AAASQ9NRG9 546 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 GCKP35557 465 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 TAS2R40P59535 323 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 FAM182AQ5T1J6 154 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 BBOF1Q8ND07 529 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 TBC1D22BQ9NU19 505 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 ZNF70Q9UC06 446 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 SLC12A4Q9UP95 1085 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 MYBPC2Q14324 1141 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 TMEM143Q96AN5 459 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 ZWILCHQ9H900 591 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 ATP6V0A4Q9HBG4 840 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 PCDHB2Q9Y5E7 798 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 IKBKGQ9Y6K9 419 aa17.16■□□□□ 0.34
SNCAIP-202ENST00000261368 BANF1O75531 89 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 APBA3O96018 575 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 POLGP54098 1239 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 GTF2BQ00403 316 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 RNASELQ05823 741 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 MRPL47Q9HD33 250 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 BHMG1C9JSJ3 638 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 CETPP11597 493 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 BPIFB4P59827 614 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 CYP24A1Q07973 514 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 STAT4Q14765 748 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 RAB3IPQ96QF0 476 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 FHDC1Q9C0D6 1143 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-202ENST00000261368 HADHBP55084 474 aaKnown RBP17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 CAV1Q03135 178 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 OVGP1Q12889 678 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 BBS9Q3SYG4 887 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 ZBTB33Q86T24 672 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 CD101Q93033 1021 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 EP400Q96L91 3159 aa17.14■□□□□ 0.34
SNCAIP-202ENST00000261368 ASTN2O75129 1339 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 A0A0G2JND7 137 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 CFHP08603 1231 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 SIX1Q15475 284 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 PCNX4Q63HM2 1172 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 MFSD5Q6N075 450 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 TRIM11Q96F44 468 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 ZNF668Q96K58 619 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 NPHS2Q9NP85 383 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 TXLNGQ9NUQ3 528 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 DNPEPQ9ULA0 475 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 PHTF1Q9UMS5 762 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 ATP8B3O60423 1300 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 PTK6Q13882 451 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 SMTNL2Q2TAL5 461 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 BSNDQ8WZ55 320 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 SPDL1Q96EA4 605 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 POLR3FQ9H1D9 316 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 C15orf41Q9Y2V0 281 aa17.14■□□□□ 0.33
SNCAIP-202ENST00000261368 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MRPS9P82933 396 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 SPP2Q13103 211 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 FYB2Q5VWT5 728 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 DNAJC24Q6P3W2 148 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 PALM2Q8IXS6 379 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 SAE1Q9UBE0 346 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MAPK13O15264 365 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 ASNSP08243 561 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 PDHA1P08559 390 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MUTP22033 750 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 CCHCR1Q8TD31 782 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MAGEB18Q96M61 343 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MCEEQ96PE7 176 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 TMEM121Q9BTD3 319 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 PROSCO94903 275 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 ICAM1P05362 532 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 CAP2P40123 477 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 SLC1A1P43005 524 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 OSTNP61366 133 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-202ENST00000261368 PCDHA10Q9Y5I2 948 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms