RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LRRC57Q8N9N7 239 aa23.96■■□□□ 1.43
SIX3-201ENST00000260653 SLC35G2Q8TBE7 412 aa23.96■■□□□ 1.43
SIX3-201ENST00000260653 PACSIN2Q9UNF0 486 aaPredicted RBP23.96■■□□□ 1.43
SIX3-201ENST00000260653 RTN2O75298 545 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 GZMAP12544 262 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 CXCR5P32302 372 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 NKX3-2P78367 333 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 TEX35Q5T0J7 233 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 SCARA5Q6ZMJ2 495 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 UBR7Q8N806 425 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 RBBP8NLQ8NC74 664 aaPredicted RBP23.95■■□□□ 1.43
SIX3-201ENST00000260653 CNTN6Q9UQ52 1028 aa23.95■■□□□ 1.43
SIX3-201ENST00000260653 ITGB3P05106 788 aa23.95■■□□□ 1.42
SIX3-201ENST00000260653 PCBP1Q15365 356 aaKnown RBP eCLIP23.95■■□□□ 1.42
SIX3-201ENST00000260653 IFI16Q16666 785 aaKnown RBP23.95■■□□□ 1.42
SIX3-201ENST00000260653 GDF6Q6KF10 455 aaPredicted RBP23.95■■□□□ 1.42
SIX3-201ENST00000260653 RSRC2Q7L4I2 434 aaKnown RBP23.95■■□□□ 1.42
SIX3-201ENST00000260653 COG1Q8WTW3 980 aa23.95■■□□□ 1.42
SIX3-201ENST00000260653 ANKRD7Q92527 254 aa23.95■■□□□ 1.42
SIX3-201ENST00000260653 OSBPL9Q96SU4 736 aa23.95■■□□□ 1.42
SIX3-201ENST00000260653 PIN4Q9Y237 131 aaKnown RBP23.95■■□□□ 1.42
SIX3-201ENST00000260653 HES2Q9Y543 173 aa23.95■■□□□ 1.42
SIX3-201ENST00000260653 CD58P19256 250 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 TMEM132DQ14C87 1099 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 TAF2Q6P1X5 1199 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 CXorf38Q8TB03 319 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 CXCL16Q9H2A7 254 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 SNTG2Q9NY99 539 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 HYOU1Q9Y4L1 999 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 ASGR1P07306 291 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 ASPAP45381 313 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 VEGFBP49765 207 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 GUCY2FP51841 1108 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 BPIFB4P59827 614 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 HTRA3P83110 453 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 PTPROQ16827 1216 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 FAM47CQ5HY64 1035 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 MEI1Q5TIA1 1274 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 NME8Q8N427 588 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 MMS19Q96T76 1030 aa23.94■■□□□ 1.42
SIX3-201ENST00000260653 CCDC94Q9BW85 323 aaPredicted RBP23.94■■□□□ 1.42
SIX3-201ENST00000260653 HMGCRP04035 888 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 DNA2P51530 1060 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 CRYBB1P53674 252 aaPredicted RBP23.93■■□□□ 1.42
SIX3-201ENST00000260653 KCNA10Q16322 511 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 GOLGA1Q92805 767 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 POLIQ9UNA4 740 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 THSD7BQ9C0I4 1608 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 CTAGE15A4D2H0 777 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 WEE2P0C1S8 567 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 CTAGE8P0CG41 777 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 GNA15P30679 374 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 CTAGE6Q86UF2 777 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 CTAGE4Q8IX94 777 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 NXF3Q9H4D5 531 aaKnown RBP23.93■■□□□ 1.42
SIX3-201ENST00000260653 CISHQ9NSE2 258 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 NXF1Q9UBU9 619 aaKnown RBP23.93■■□□□ 1.42
SIX3-201ENST00000260653 CHORDC1Q9UHD1 332 aaPredicted RBP23.93■■□□□ 1.42
SIX3-201ENST00000260653 COG5Q9UP83 839 aa23.93■■□□□ 1.42
SIX3-201ENST00000260653 ATMINO43313 823 aaPredicted RBP23.92■■□□□ 1.42
SIX3-201ENST00000260653 PRLRP16471 622 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 CLEC16AQ2KHT3 1053 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 WNT8BQ93098 351 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 EPC1Q9H2F5 836 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 C2CD2Q9Y426 696 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 PDE2AO00408 941 aaPredicted RBP23.92■■□□□ 1.42
SIX3-201ENST00000260653 TCP1P17987 556 aaKnown RBP23.92■■□□□ 1.42
SIX3-201ENST00000260653 HOXD10P28358 340 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 ZNF132P52740 706 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 APBB1IPQ7Z5R6 666 aaPredicted RBP23.92■■□□□ 1.42
SIX3-201ENST00000260653 ZNF677Q86XU0 584 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 CREG2Q8IUH2 290 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
SIX3-201ENST00000260653 KLHDC9Q8NEP7 349 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 KIF12Q96FN5 646 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 TSKSQ9UJT2 592 aa23.92■■□□□ 1.42
SIX3-201ENST00000260653 CFHP08603 1231 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 MAP2K2P36507 400 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 MAP3K21Q5TCX8 1036 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 CCSAPQ6IQ19 270 aaPredicted RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 DAAM2Q86T65 1068 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 CELF4Q9BZC1 486 aaKnown RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 TRIM6Q9C030 488 aaPredicted RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 BUB1BO60566 1050 aaPredicted RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 AXLP30530 894 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 POLR2BP30876 1174 aaKnown RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 SSTR3P32745 418 aaPredicted RBP23.91■■□□□ 1.42
SIX3-201ENST00000260653 GPC5P78333 572 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 WDR72Q3MJ13 1102 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 CAGE1Q8TC20 777 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 RAET1EQ8TD07 263 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 RALGAPA2Q2PPJ7 1873 aa23.91■■□□□ 1.42
SIX3-201ENST00000260653 ZNF394Q53GI3 561 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 ACAD10Q6JQN1 1059 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 SLFN11Q7Z7L1 901 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 TAF4BQ92750 862 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 SNX27Q96L92 541 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 UNGP13051 313 aaPredicted RBP23.9■■□□□ 1.42
SIX3-201ENST00000260653 RAP1GAPP47736 663 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 MRPS6P82932 125 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms