RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CHKAP35790 457 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CXCL9Q07325 125 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CACNB2Q08289 660 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 HDAC1Q13547 482 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 PTRHD1Q6GMV3 140 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 FBXO46Q6PJ61 603 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 CYFIP1Q7L576 1253 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CAND1Q86VP6 1230 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 COLGALT2Q8IYK4 626 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 LRRC43Q8N309 656 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 TMEM145Q8NBT3 493 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 MAGEC3Q8TD91 643 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 TBCKQ8TEA7 893 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 METTL21AQ8WXB1 218 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 KRT35Q92764 455 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CRELD1Q96HD1 420 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 NECTIN4Q96NY8 510 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 EPS15L1Q9UBC2 864 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 GUCA1BQ9UMX6 200 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ZNF510Q9Y2H8 683 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 PASKQ96RG2 1323 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 UBA6A0AVT1 1052 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 SYNDIG1LA6NDD5 238 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 URADA6NGE7 173 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 MOXD2PA6NHM9 499 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 TREHO43280 583 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 GUCY1B2O75343 617 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 NDUFS3O75489 264 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 RHOBTB1O94844 696 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CXCL14O95715 111 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ERCC1P07992 297 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 HMBSP08397 361 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CLTAP09496 248 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CNPP09543 421 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 CMA1P23946 247 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 GUCY1A2P33402 732 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ARHGAP25P42331 645 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 TRPC1P48995 793 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 RASSF2P50749 326 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 KRT72Q14CN4 511 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 PDCD2Q16342 344 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 LONRF2Q1L5Z9 754 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 EFHC1Q5JVL4 640 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ESRP1Q6NXG1 681 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 SERPINA13PQ6UXR4 307 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CAMK1DQ8IU85 385 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 IFT20Q8IY31 132 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ATPAF2Q8N5M1 289 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNF38-201ENST00000259605 DNERQ8NFT8 737 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 OR6P1Q8NGX9 317 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CXorf40AQ8TE69 158 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CXorf40BQ96DE9 158 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 BHMT2Q9H2M3 363 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 VTI1BQ9UEU0 232 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 PCDHGA4Q9Y5G9 962 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 SF3B1O75533 1304 aaKnown RBP eCLIP4.25□□□□□ -1.732e-7■■■■■ 53.5
RNF38-201ENST00000259605 ZMYM6O95789 1325 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ADAMTS12P58397 1594 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CACNB4O00305 520 aaPredicted RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 F9P00740 461 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 KRT7P08729 469 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 FBLN1P23142 703 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 RFC2P35250 354 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ATP1A2P50993 1020 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 NLRP11P59045 1033 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 MRPS15P82914 257 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 SF3B3Q15393 1217 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 SF3B4Q15427 424 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNF38-201ENST00000259605 E2F4Q16254 413 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 EFCAB12Q6NXP0 572 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 FBXL19Q6PCT2 694 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CD99L2Q8TCZ2 262 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 CALML6Q8TD86 181 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 NELFBQ8WX92 580 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 MRRFQ96E11 262 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 TSPAN17Q96FV3 270 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 RBM41Q96IZ5 413 aaKnown RBP4.25□□□□□ -1.73
RNF38-201ENST00000259605 MTA3Q9BTC8 594 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 TRIM15Q9C019 465 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 DCTPP1Q9H773 170 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 KCTD5Q9NXV2 234 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 AHSPQ9NZD4 102 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 AGAP1Q9UPQ3 857 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 DYRK1BQ9Y463 629 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 DTNAQ9Y4J8 743 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 SNX9Q9Y5X1 595 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 ABCC12Q96J65 1359 aa4.25□□□□□ -1.73
RNF38-201ENST00000259605 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 CCDC78A2IDD5 438 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 UNCXA6NJT0 531 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SMIM23A6NLE4 172 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 HGSO14964 777 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 SLC26A4O43511 780 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SMIM24O75264 130 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RASSF9O75901 435 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 GSNP06396 782 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms