RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.24■□□□□ 0.83
UPK3B-201ENST00000257632 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
UPK3B-201ENST00000257632 RXFP1Q9HBX9 757 aa20.24■□□□□ 0.83
UPK3B-201ENST00000257632 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
UPK3B-201ENST00000257632 MUC3AQ02505 3323 aa20.24■□□□□ 0.83
UPK3B-201ENST00000257632 NCOR1O75376 2440 aa20.24■□□□□ 0.83
UPK3B-201ENST00000257632 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
UPK3B-201ENST00000257632 EPCAMP16422 314 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 COL9A1P20849 921 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 FGFR3P22607 806 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
UPK3B-201ENST00000257632 KCNC3Q14003 757 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 SURF1Q15526 300 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 ANKRD54Q6NXT1 300 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 CBWD2Q8IUF1 395 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 EFCAB13Q8IY85 973 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
UPK3B-201ENST00000257632 SMARCE1Q969G3 411 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 MSLNLQ96KJ4 702 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 DPP3Q9NY33 737 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 FNIP2Q9P278 1114 aa20.23■□□□□ 0.83
UPK3B-201ENST00000257632 SYN3O14994 580 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 EXOC3O60645 756 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 GLUD1P00367 558 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 RPL17P18621 184 aaKnown RBP20.22■□□□□ 0.83
UPK3B-201ENST00000257632 CLCN4P51793 760 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 SMAD4Q13485 552 aaKnown RBP20.22■□□□□ 0.83
UPK3B-201ENST00000257632 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
UPK3B-201ENST00000257632 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 ELMSAN1Q6PJG2 1045 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 DSTYKQ6XUX3 929 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 ANKS3Q6ZW76 656 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 C12orf56Q8IXR9 622 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
UPK3B-201ENST00000257632 SLC22A17Q8WUG5 538 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 SUSD3Q96L08 255 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 GSDMAQ96QA5 445 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 DZANK1Q9NVP4 752 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 MAPK8IP1Q9UQF2 711 aa20.22■□□□□ 0.83
UPK3B-201ENST00000257632 PDXKO00764 312 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 CALUO43852 315 aaPredicted RBP20.21■□□□□ 0.83
UPK3B-201ENST00000257632 TMEM191BP0C7N4 346 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 BMP1P13497 986 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 HOXB8P17481 243 aaPredicted RBP20.21■□□□□ 0.83
UPK3B-201ENST00000257632 WNT7BP56706 349 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 PALB2Q86YC2 1186 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 APPL2Q8NEU8 664 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 ERCC4Q92889 916 aaPredicted RBP20.21■□□□□ 0.83
UPK3B-201ENST00000257632 FBXL18Q96ME1 805 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 APOL5Q9BWW9 433 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 KCTD10Q9H3F6 313 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 RAPGEFL1Q9UHV5 662 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 PCDHA5Q9Y5H7 936 aa20.21■□□□□ 0.83
UPK3B-201ENST00000257632 PLXNA3P51805 1871 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 BDP1A6H8Y1 2624 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 GRXCR2A6NFK2 248 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 PPEF2O14830 753 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 MBTPS2O43462 519 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 IL9P15248 144 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
UPK3B-201ENST00000257632 ELOA2Q8IYF1 753 aaPredicted RBP20.2■□□□□ 0.82
UPK3B-201ENST00000257632 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
UPK3B-201ENST00000257632 SMRP1Q8NCR6 262 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 FNBP1Q96RU3 617 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 MTRRQ9UBK8 725 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 DPP7Q9UHL4 492 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 PCDHB8Q9UN66 801 aa20.2■□□□□ 0.82
UPK3B-201ENST00000257632 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
UPK3B-201ENST00000257632 ANO9A1A5B4 782 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 H7C4K7 107 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 PIRO00625 290 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 TNNC2P02585 160 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 PAX3P23760 479 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 LMBRD2Q68DH5 695 aaPredicted RBP20.19■□□□□ 0.82
UPK3B-201ENST00000257632 SMYD4Q8IYR2 804 aaPredicted RBP20.19■□□□□ 0.82
UPK3B-201ENST00000257632 ZNF560Q96MR9 790 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 CLSTN3Q9BQT9 956 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 MAN1C1Q9NR34 630 aa20.19■□□□□ 0.82
UPK3B-201ENST00000257632 ARHGEF37A1IGU5 675 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 NR3C1P04150 777 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 ITGB3P05106 788 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 KRT19P08727 400 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 DLATP10515 647 aaKnown RBP20.18■□□□□ 0.82
UPK3B-201ENST00000257632 TNNI1P19237 187 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 OR1D2P34982 312 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 TAF6P49848 677 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 LILRA4P59901 499 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 RARS2Q5T160 578 aaKnown RBP20.18■□□□□ 0.82
UPK3B-201ENST00000257632 ZNF658Q5TYW1 1059 aaPredicted RBP20.18■□□□□ 0.82
UPK3B-201ENST00000257632 ZNF280DQ6N043 979 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 CES5AQ6NT32 575 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 SYCE2Q6PIF2 218 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 USP37Q86T82 979 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
UPK3B-201ENST00000257632 GTPBP4Q9BZE4 634 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms