RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TEDDM1Q5T9Z0 273 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 PPP4R3CPQ6ZMV5 832 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 MFSD6Q6ZSS7 791 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 NUP93Q8N1F7 819 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 CLIP3Q96DZ5 547 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 OSBPL6Q9BZF3 934 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 SMARCAD1Q9H4L7 1026 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 PAG1Q9NWQ8 432 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM153AQ9UHL3 310 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 GGT7Q9UJ14 662 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 RPL26L1Q9UNX3 145 aaKnown RBP7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 WDR17Q8IZU2 1322 aa7.09□□□□□ -1.28
PDGFRA-201ENST00000257290 ASAP2O43150 1006 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ZBTB43O43298 467 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TRMUO75648 421 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 UBOX5O94941 541 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ARMCX4Q5H9R4 360 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC10A5Q5PT55 438 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TSHZ3Q63HK5 1081 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ATG16L1Q676U5 607 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TXNDC11Q6PKC3 985 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 KIAA0408Q6ZU52 694 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NECAB1Q8N987 351 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NT5C3AQ9H0P0 336 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TBC1D14Q9P2M4 693 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PDZK1P1A8MUH7 402 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM47E-STBD1D6RA91 191 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 BACH1O14867 736 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 BMP10O95393 424 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 GARTP22102 1010 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 LACTB2Q53H82 288 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NIPAL1Q6NVV3 410 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 CCDC149Q6ZUS6 474 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 OR8K3Q8NH51 312 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 DHX38Q92620 1227 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 SIPA1Q96FS4 1042 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TTC25Q96NG3 672 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 KLHL32Q96NJ5 620 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 EPB41L4AQ9HCS5 686 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ING3Q9NXR8 418 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF224Q9NZL3 707 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 RTCBQ9Y3I0 505 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 USP32Q8NFA0 1604 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PTPRUQ92729 1446 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 THAP12O43422 761 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 GAS2O43903 313 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ETV5P41161 510 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NR1H2P55055 460 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TRAP1Q12931 704 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 MORF4L2Q15014 288 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 SETD3Q86TU7 594 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 METTL6Q8TCB7 284 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ZIM3Q96PE6 472 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 FANCEQ9HB96 536 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 CUEDC1Q9NWM3 386 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 RIMS1Q86UR5 1692 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ORC4O43929 436 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 SHOX2O60902 331 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 RBP3P10745 1247 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 DMC1Q14565 340 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 MAPRE2Q15555 327 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 AARS2Q5JTZ9 985 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM20CQ8IXL6 584 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 DIS3L2Q8IYB7 885 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 NARS2Q96I59 477 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TGS1Q96RS0 853 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PANK4Q9NVE7 773 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 FAIMQ9NVQ4 179 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 CLRN2A0PK11 232 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 HAT1O14929 419 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 OR5F1O95221 314 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PAHP00439 452 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM58BPP0C7Q3 252 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PCP11498 1178 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 RCVRNP35243 200 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 AFMP43652 599 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 CLK1P49759 484 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 RASSF7Q02833 373 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 TFCP2Q12800 502 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 S100PBPQ96BU1 408 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF221Q9UK13 617 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 PA2G4Q9UQ80 394 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 DTNAQ9Y4J8 743 aa7.08□□□□□ -1.28
PDGFRA-201ENST00000257290 MYO3AQ8NEV4 1616 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SGK1O00141 431 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 RFX1P22670 979 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CHN2P52757 468 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 THOC5Q13769 683 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SSX2Q16385 188 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 MCMDC2Q4G0Z9 681 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ARHGEF16Q5VV41 709 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 DENND6AQ8IWF6 608 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TRMT44Q8IYL2 757 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CHPFQ8IZ52 775 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 PRCCQ92733 491 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms