RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NELFCDQ8IXH7 590 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 VN1R2Q8NFZ6 395 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 NOC3LQ8WTT2 800 aaKnown RBP9.26□□□□□ -0.93
TMEM258-201ENST00000257262 CBWD1Q9BRT8 395 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 EMILIN2Q9BXX0 1053 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 ASB7Q9H672 318 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 EXOC1Q9NV70 894 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 TUBGCP4Q9UGJ1 667 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 BARX2Q9UMQ3 279 aaPredicted RBP9.26□□□□□ -0.93
TMEM258-201ENST00000257262 SSX2IPQ9Y2D8 614 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 SF3B1O75533 1304 aaKnown RBP eCLIP9.26□□□□□ -0.93
TMEM258-201ENST00000257262 XIRP2A4UGR9 3374 aa9.26□□□□□ -0.93
TMEM258-201ENST00000257262 PRUNE2Q8WUY3 3088 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 FSD2A1L4K1 749 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 I3L4J1 428 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 CLIC2O15247 247 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 CYP3A5P20815 502 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 GUCY2FP51841 1108 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 WNT7BP56706 349 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 POU5F1Q01860 360 aaKnown RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 FAM160A1Q05DH4 1040 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 PNOCQ13519 176 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 KNOP1Q1ED39 458 aaKnown RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 BMT2Q1RMZ1 405 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RTP2Q5QGT7 225 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 SPATA1Q5VX52 437 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 PRSS55Q6UWB4 352 aaPredicted RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 GPD1LQ8N335 351 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 KIAA0895Q8NCT3 520 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 LNX1Q8TBB1 728 aaPredicted RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 SLC22A17Q8WUG5 538 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 MSLNLQ96KJ4 702 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 TSPAN18Q96SJ8 248 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RXFP1Q9HBX9 757 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 RAPGEFL1Q9UHV5 662 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 UBQLN1Q9UMX0 589 aaKnown RBP9.25□□□□□ -0.93
TMEM258-201ENST00000257262 HCFC2Q9Y5Z7 792 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 VWA8A3KMH1 1905 aa9.25□□□□□ -0.93
TMEM258-201ENST00000257262 TCF20Q9UGU0 1960 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 KIAA0391O15091 583 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 TEX28O15482 410 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 MBTPS2O43462 519 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 XPOTO43592 962 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 TRAPPC3O43617 180 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 EXTL3O43909 919 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 IL18RAPO95256 599 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 NFICP08651 508 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 IL9P15248 144 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 EPCAMP16422 314 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 RPL17P18621 184 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 COL9A1P20849 921 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 FGFR3P22607 806 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 LRPAP1P30533 357 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 CLCN4P51793 760 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 ELAVL2Q12926 359 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 TMEM132DQ14C87 1099 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 ANKRD54Q6NXT1 300 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 PPFIBP1Q86W92 1011 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 PALB2Q86YC2 1186 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 RDH13Q8NBN7 331 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 BEST2Q8NFU1 509 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 CASP10Q92851 521 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 CCDC47Q96A33 483 aaKnown RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 TIGD1Q96MW7 591 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 TTPALQ9BTX7 342 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 APOL5Q9BWW9 433 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 AGPAT3Q9NRZ7 376 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 DPP3Q9NY33 737 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 RBAKQ9NYW8 714 aaPredicted RBP9.24□□□□□ -0.93
TMEM258-201ENST00000257262 HSPBP1Q9NZL4 362 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 FNIP2Q9P278 1114 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 CD207Q9UJ71 328 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 DERAQ9Y315 318 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 UBE4BO95155 1302 aa9.24□□□□□ -0.93
TMEM258-201ENST00000257262 ZNF233A6NK53 670 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PIRO00625 290 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PPEF2O14830 753 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 ADH1AP07327 375 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SPATA31D3P0C874 917 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SRGAP2BP0DMP2 458 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 TKTP29401 623 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 MCM4P33991 863 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SNRPFP62306 86 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 KCNB1Q14721 858 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PSMD5Q16401 504 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PUS10Q3MIT2 529 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 C9orf57Q5W0N0 161 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SYCE2Q6PIF2 218 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms