RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 TDRD10Q5VZ19 366 aaKnown RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 CCDC121Q6ZUS5 278 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 TAB3Q8N5C8 712 aaPredicted RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 LMO3Q8TAP4 145 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 MGARPQ8TDB4 240 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 FAM118BQ9BPY3 351 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 FGFR4P22455 802 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 ATP5DP30049 168 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 SP2Q02086 613 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 PPATQ06203 517 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 ZACNQ401N2 412 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 SNCAIPQ9Y6H5 919 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 RASGRF2O14827 1237 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 DDX3YO15523 660 aaKnown RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 RNF8O76064 485 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 CAPSQ13938 189 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 LRRC31Q6UY01 552 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 FBXO25Q8TCJ0 367 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 NIF3L1Q9GZT8 377 aa16.72■□□□□ 0.27
RFX1-201ENST00000254325 FAM49AQ9H0Q0 323 aaPredicted RBP16.72■□□□□ 0.27
RFX1-201ENST00000254325 MYL6P60660 151 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 CXCL11O14625 94 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 HBP1O60381 514 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 FARP2O94887 1054 aaPredicted RBP16.71■□□□□ 0.27
RFX1-201ENST00000254325 PSMA2P25787 234 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 BBOF1Q8ND07 529 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 CABS1Q96KC9 395 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
RFX1-201ENST00000254325 ZWILCHQ9H900 591 aa16.71■□□□□ 0.27
RFX1-201ENST00000254325 AGPSO00116 658 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 EIF3HO15372 352 aaKnown RBP eCLIP16.71■□□□□ 0.26
RFX1-201ENST00000254325 RGS20O76081 388 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.26
RFX1-201ENST00000254325 CCDC89Q8N998 374 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 HEXIM2Q96MH2 286 aaKnown RBP16.71■□□□□ 0.26
RFX1-201ENST00000254325 APOL6Q9BWW8 343 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 GPR88Q9GZN0 384 aa16.71■□□□□ 0.26
RFX1-201ENST00000254325 NOCTQ9UK39 431 aaKnown RBP16.71■□□□□ 0.26
RFX1-201ENST00000254325 CHRNB2P17787 502 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 LMNB2Q03252 620 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 CYP4F22Q6NT55 531 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 SLC39A4Q6P5W5 647 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 STXBP5LQ9Y2K9 1186 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 CSDE1O75534 798 aaKnown RBP16.7■□□□□ 0.26
RFX1-201ENST00000254325 CEP128Q6ZU80 1094 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 ANKRD42Q8N9B4 389 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 C1orf131Q8NDD1 294 aaKnown RBP16.7■□□□□ 0.26
RFX1-201ENST00000254325 OR5B17Q8NGF7 314 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 RBM41Q96IZ5 413 aaKnown RBP16.7■□□□□ 0.26
RFX1-201ENST00000254325 ERAP1Q9NZ08 941 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 PCDHA3Q9Y5H8 950 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 SGK1O00141 431 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 GAS2O43903 313 aaKnown RBP16.7■□□□□ 0.26
RFX1-201ENST00000254325 CYP1A2P05177 515 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 TTMPQ5BVD1 217 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 GPAT2Q6NUI2 795 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 ABRAQ8N0Z2 381 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 COPS5Q92905 334 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 MCEEQ96PE7 176 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
RFX1-201ENST00000254325 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
RFX1-201ENST00000254325 IFNAR2P48551 515 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
RFX1-201ENST00000254325 GHRHRQ02643 423 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 FSTL1Q12841 308 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 SCYL2Q6P3W7 929 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 ZPBP2Q6X784 338 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 VPS37BQ9H9H4 285 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
RFX1-201ENST00000254325 RALAP11233 206 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 C1orf220Q5T0J3 134 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 ANKS4BQ8N8V4 417 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 RSAD2Q8WXG1 361 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 SAMD15Q9P1V8 674 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 RARAP10276 462 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 ADCY2Q08462 1091 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
RFX1-201ENST00000254325 C6orf118Q5T5N4 469 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 BRSK2Q8IWQ3 736 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 FEZF2Q8TBJ5 459 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 OSBPL8Q9BZF1 889 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 ERVK-5Q9HDB9 667 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 NKIRAS1Q9NYS0 192 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 TJP3O95049 919 aa16.69■□□□□ 0.26
RFX1-201ENST00000254325 ICAM3P32942 547 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms