RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 METTL7BQ6UX53 244 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 LRIG3Q6UXM1 1119 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 MORC4Q8TE76 937 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 SEPT1Q8WYJ6 367 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 ZBTB10Q96DT7 871 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 CGRRF1Q99675 332 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 PCDHB4Q9Y5E5 795 aa19.97■□□□□ 0.79
PDLIM4-201ENST00000253754 FAM187AA6NFU0 413 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 EIF3HO15372 352 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 SRGAP2CP0DJJ0 459 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 NR1D1P20393 614 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 CHRNA3P32297 505 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 RWDD2BP57060 319 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 PPP2R5EQ16537 467 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 FAM160B1Q5W0V3 765 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 ZDHHC24Q6UX98 284 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 FBXO25Q8TCJ0 367 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 KCNG1Q9UIX4 513 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 PLXNA1Q9UIW2 1896 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 IGF2BP3O00425 579 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 STRNO43815 780 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 MAFO75444 373 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 HPDP32754 393 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 NSFP46459 744 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 NOP14P78316 857 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 GUCY1A3Q02108 690 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 CLUL1Q15846 466 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 RGMBQ6NW40 437 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 PAXIP1Q6ZW49 1069 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 C11orf70Q9BRQ4 267 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 GRHL1Q9NZI5 618 aa19.96■□□□□ 0.79
PDLIM4-201ENST00000253754 PASKQ96RG2 1323 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 ASB14A6NK59 587 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 CYP1A1P04798 512 aaPredicted RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 GJB1P08034 283 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 CLTAP09496 248 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 MYZAPP0CAP1 466 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 RPL21P46778 160 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 FAM110CQ1W6H9 321 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 ZNF792Q3KQV3 632 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 UBAP2Q5T6F2 1119 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 KDM7AQ6ZMT4 941 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 ARMCX2Q7L311 632 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 GPR142Q7Z601 462 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 SMC1BQ8NDV3 1235 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 BBXQ8WY36 941 aaPredicted RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 KCNN1Q92952 543 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 TXLNGYQ9BZA5 131 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 TMEM134Q9H6X4 195 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 PCYOX1Q9UHG3 505 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 SIP14410 1827 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 GOLGA6L10A6NI86 522 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 O00370 1275 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 PPFIA4O75335 1185 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 LDHAP00338 332 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 HSPA6P17066 643 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 GNA15P30679 374 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 NCOA4Q13772 614 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 MON1BQ7L1V2 547 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 RBBP8NLQ8NC74 664 aaPredicted RBP19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 TRAPPC12Q8WVT3 735 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 FAM212AQ96EL1 285 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 HERPUD2Q9BSE4 406 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 TCHPQ9BT92 498 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 AZI2Q9H6S1 392 aa19.95■□□□□ 0.78
PDLIM4-201ENST00000253754 ZBTB42B2RXF5 422 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 ZEB2O60315 1214 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 FAM189A1O60320 539 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 MSCO60682 206 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 PPFIA2O75334 1257 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 GJB6O95452 261 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 CST3P01034 146 aaPredicted RBP19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 HTRA3P83110 453 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 CENPCQ03188 943 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 MTMR3Q13615 1198 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 KCNV1Q6PIU1 500 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 C1orf54Q8WWF1 131 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 COPS5Q92905 334 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 GPR20Q99678 358 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 BCCIPQ9P287 314 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 RASAL2Q9UJF2 1139 aa19.94■□□□□ 0.78
PDLIM4-201ENST00000253754 MANSC4A6NHS7 340 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 HMGB1P1B2RPK0 211 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 COILP38432 576 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 DPP9Q86TI2 863 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 ZNF677Q86XU0 584 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 ABRAQ8N0Z2 381 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 RNF149Q8NC42 400 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 BCAS4Q8TDM0 211 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 FAM81BQ96LP2 452 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 MTMR12Q9C0I1 747 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 EPB41L4BQ9H329 900 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 DOCK3Q8IZD9 2030 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 DCDC2CA8MYV0 355 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms