RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 DNAJC24Q6P3W2 148 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 ENOSF1Q7L5Y1 443 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 WHRNQ9P202 907 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 ONECUT3O60422 494 aaPredicted RBP19.58■□□□□ 0.72
LRP3-201ENST00000253193 NCKAP1LP55160 1127 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 NLRP11P59045 1033 aaKnown RBP19.58■□□□□ 0.72
LRP3-201ENST00000253193 TFAMQ00059 246 aaKnown RBP19.58■□□□□ 0.72
LRP3-201ENST00000253193 IL9RQ01113 521 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 SPDYCQ5MJ68 293 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 ANKRD35Q8N283 1001 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 RBBP8NLQ8NC74 664 aaPredicted RBP19.58■□□□□ 0.72
LRP3-201ENST00000253193 P3H4Q92791 437 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 AKT1S1Q96B36 256 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 DCLK3Q9C098 648 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 KDM4CQ9H3R0 1056 aa19.58■□□□□ 0.72
LRP3-201ENST00000253193 NXF1Q9UBU9 619 aaKnown RBP19.58■□□□□ 0.72
LRP3-201ENST00000253193 SRGAP2CP0DJJ0 459 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SLC1A1P43005 524 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ARSEP51690 589 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 MIS18BP1Q6P0N0 1132 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 C12orf56Q8IXR9 622 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 BBOF1Q8ND07 529 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 LRRC19Q9H756 370 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ZWILCHQ9H900 591 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 RIPK3Q9Y572 518 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ZNF536O15090 1300 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SBF2Q86WG5 1849 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 GH1P01241 217 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SPATA21Q7Z572 469 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 C4orf33Q8N1A6 199 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 CENPTQ96BT3 561 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SERPINB12Q96P63 405 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ZNRF3Q9ULT6 936 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 L3MBTL1Q9Y468 752 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ATP8B3O60423 1300 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 ZSCAN5DPP0CG00 497 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 CA4P22748 312 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 SLC8A1P32418 973 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 HADHBP55084 474 aaKnown RBP19.57■□□□□ 0.72
LRP3-201ENST00000253193 SNRPFP62306 86 aaKnown RBP19.57■□□□□ 0.72
LRP3-201ENST00000253193 CIAPIN1Q6FI81 312 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 CYP26B1Q9NR63 512 aa19.57■□□□□ 0.72
LRP3-201ENST00000253193 FSCN2O14926 492 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 PAEPP09466 180 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 MARK3P27448 753 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 ZBED8Q8IZ13 594 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 STRA6Q9BX79 667 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 NAALADL1Q9UQQ1 740 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 BHMG1C9JSJ3 638 aaPredicted RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 ASAP2O43150 1006 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 CDC25CP30307 473 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 CLNS1AP54105 237 aaKnown RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 ACTR2P61160 394 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 ANKMY2Q8IV38 441 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 MYOZ2Q9NPC6 264 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 A1CFQ9NQ94 594 aaKnown RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 C5orf60A6NFR6 353 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 CDH16O75309 829 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 MAGEA4P43358 317 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 ELF3P78545 371 aaPredicted RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 LACTBP83111 547 aaPredicted RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 CXCL9Q07325 125 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 SAMD7Q7Z3H4 446 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 OLIG1Q8TAK6 271 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 ATXN2LQ8WWM7 1075 aaKnown RBP19.56■□□□□ 0.72
LRP3-201ENST00000253193 MCEEQ96PE7 176 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 ADAM7Q9H2U9 754 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 NINJ2Q9NZG7 142 aa19.56■□□□□ 0.72
LRP3-201ENST00000253193 H0YCG3 227 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 PROSCO94903 275 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 MYBL1P10243 752 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 NOP14P78316 857 aaKnown RBP19.55■□□□□ 0.72
LRP3-201ENST00000253193 NIPA1Q7RTP0 329 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 FBF1Q8TES7 1133 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 CFAP57Q96MR6 1250 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 SMC6Q96SB8 1091 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 TXLNGYQ9BZA5 131 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 NEU2Q9Y3R4 380 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 EXTL3O43909 919 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 ZNF862O60290 1169 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 TAS2R40P59535 323 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 EMC2Q15006 297 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 SYCP2LQ5T4T6 812 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 CCDC60Q8IWA6 550 aaPredicted RBP19.55■□□□□ 0.72
LRP3-201ENST00000253193 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 IKBKGQ9Y6K9 419 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 SCINQ9Y6U3 715 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 CFHP08603 1231 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 CAV1Q03135 178 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 CUL2Q13617 745 aa19.55■□□□□ 0.72
LRP3-201ENST00000253193 ZNF317Q96PQ6 595 aaPredicted RBP19.55■□□□□ 0.72
LRP3-201ENST00000253193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.55■□□□□ 0.724e-6■□□□□ 9
LRP3-201ENST00000253193 PIAS1O75925 651 aa19.54■□□□□ 0.72
LRP3-201ENST00000253193 GCNT1Q02742 428 aa19.54■□□□□ 0.72
LRP3-201ENST00000253193 NCOA4Q13772 614 aa19.54■□□□□ 0.72
LRP3-201ENST00000253193 SKAP2O75563 359 aaPredicted RBP19.54■□□□□ 0.72
LRP3-201ENST00000253193 TJP3O95049 919 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms