RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TEKT1Q969V4 418 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CBWD1Q9BRT8 395 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CENPKQ9BS16 269 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 LXNQ9BS40 222 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 H3BRJ5 948 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 KRT10P13645 584 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CD19P15391 556 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 COG7P83436 770 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 ST13P4Q8IZP2 240 aaPredicted RBP16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CYP4X1Q8N118 509 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 DHX38Q92620 1227 aaKnown RBP16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CCDC17Q96LX7 622 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 SORBS3O60504 671 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 TAC1P20366 129 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 ATP6V1C1P21283 382 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 CNGA1P29973 690 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 PTGIRP43119 386 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 PPATQ06203 517 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 KPNB1Q14974 876 aaKnown RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 ARMC3Q5W041 872 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RNF43Q68DV7 783 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RAB3IL1Q8TBN0 382 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 MAK16Q9BXY0 300 aaKnown RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 F5H6K3 240 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 LPXNO60711 386 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 DLG4P78352 724 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 NSL1Q96IY1 281 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 TTC25Q96NG3 672 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 ADAM7Q9H2U9 754 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 AHCYL1O43865 530 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 KRT36O76013 467 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RPA3P35244 121 aaPredicted RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 DYNC1I2Q13409 638 aaKnown RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 VSTM1Q6UX27 236 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 HSPBP1Q9NZL4 362 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 NCANO14594 1321 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
SLC6A8-201ENST00000253122 EML1O00423 815 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 TGFB1I1O43294 461 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 RFX1P22670 979 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 PRELPP51888 382 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 PDIK1LQ8N165 341 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 MIPOL1Q8TD10 442 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 SLC13A1Q9BZW2 595 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 TAF1P21675 1872 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 HOXA10P31260 410 aaPredicted RBP16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 ABCB5Q2M3G0 1257 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 ZNF394Q53GI3 561 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 RASSF3Q86WH2 238 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 B4GALNT2Q8NHY0 566 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 IWS1Q96ST2 819 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 WDR11Q9BZH6 1224 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 LRCH1Q9Y2L9 728 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 BRWD3Q6RI45 1802 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 GPR75-ASB3A0A0A6YYF3 556 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 FAM86B1E9PN63 330 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 SPECC1L-ADORA2AF8WAN1 911 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 FAM86B2P0C5J1 330 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 KRT39Q6A163 491 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 RGS9BPQ6ZS82 235 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 NOP9Q86U38 636 aaKnown RBP16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 DENND2DQ9H6A0 471 aaPredicted RBP16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 SENP1Q9P0U3 644 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 ARMCX1Q9P291 453 aa16.79■□□□□ 0.28
SLC6A8-201ENST00000253122 MYH7P12883 1935 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 RRM1P23921 792 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 PDCD2Q16342 344 aaPredicted RBP16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 SYDE1Q6ZW31 735 aaPredicted RBP16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 HAUS6Q7Z4H7 955 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 SLC26A7Q8TE54 656 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 EIF3DO15371 548 aaKnown RBP eCLIP16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 TJP3O95049 919 aa16.78■□□□□ 0.28
SLC6A8-201ENST00000253122 ZSCAN5DPP0CG00 497 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms