RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 UROC1Q96N76 676 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 RPS6KC1Q96S38 1066 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 PRKAG2Q9UGJ0 569 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
LSM8-201ENST00000249299 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 EPHB6O15197 1021 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 STAT1P42224 750 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 KCNJ6P48051 423 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 KLK7P49862 253 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 CCL23P55773 120 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
LSM8-201ENST00000249299 NOP14P78316 857 aaKnown RBP13.91□□□□□ -0.18
LSM8-201ENST00000249299 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 GRIK3Q13003 919 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 LMBRD2Q68DH5 695 aaPredicted RBP13.91□□□□□ -0.18
LSM8-201ENST00000249299 PHLDB3Q6NSJ2 640 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 TMTC1Q8IUR5 882 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 HELQQ8TDG4 1101 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
LSM8-201ENST00000249299 ZMAT2Q96NC0 199 aaKnown RBP13.91□□□□□ -0.18
LSM8-201ENST00000249299 SPAG5Q96R06 1193 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 XYLT2Q9H1B5 865 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 SIX4Q9UIU6 781 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
LSM8-201ENST00000249299 TRIM43BA6NCK2 446 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 PIRO00625 290 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 PTGESO14684 152 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 OFD1O75665 1012 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
LSM8-201ENST00000249299 ITGB3P05106 788 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 ACTN1P12814 892 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 PRKCIP41743 596 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 IQCEQ6IPM2 695 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 RRAGAQ7L523 313 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 SHC3Q92529 594 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
LSM8-201ENST00000249299 SCLYQ96I15 445 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 GAD1Q99259 594 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 APOL6Q9BWW8 343 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
LSM8-201ENST00000249299 CNTN6Q9UQ52 1028 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 FHOD1Q9Y613 1164 aa13.9□□□□□ -0.18
LSM8-201ENST00000249299 SSU72P8A0A1W2PR75 194 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 F8VZ95 297 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.19
LSM8-201ENST00000249299 GFPT2O94808 682 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 FERP16591 822 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 SOX5P35711 763 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 MLH1P40692 756 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 ADKP55263 362 aaKnown RBP13.9□□□□□ -0.19
LSM8-201ENST00000249299 BPIFB4P59827 614 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 MYL6P60660 151 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.19
LSM8-201ENST00000249299 CUL2Q13617 745 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.19
LSM8-201ENST00000249299 NAB2Q15742 525 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 ZNF699Q32M78 642 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 C9orf57Q5W0N0 161 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 DPH6Q7L8W6 267 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 PPM1KQ8N3J5 372 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 URGCPQ8TCY9 931 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 HPDLQ96IR7 371 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 BAG1Q99933 345 aaPredicted RBP13.9□□□□□ -0.19
LSM8-201ENST00000249299 MRPL9Q9BYD2 267 aaKnown RBP13.9□□□□□ -0.19
LSM8-201ENST00000249299 GDAP2Q9NXN4 497 aa13.9□□□□□ -0.19
LSM8-201ENST00000249299 ARHGEF37A1IGU5 675 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 LRRC53A6NM62 1247 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 POLR2BP30876 1174 aaKnown RBP13.89□□□□□ -0.19
LSM8-201ENST00000249299 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 NOMO2Q5JPE7 1267 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 FAM71AQ8IYT1 594 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 SPATA18Q8TC71 538 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 BCO2Q9BYV7 579 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 PRDM5Q9NQX1 630 aaPredicted RBP13.89□□□□□ -0.19
LSM8-201ENST00000249299 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms