RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 ROPN1BQ9BZX4 212 aaPredicted RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 CCSER2Q9H7U1 834 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 ROPN1Q9HAT0 212 aaPredicted RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 CD93Q9NPY3 652 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 CNTN3Q9P232 1028 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 DDX25Q9UHL0 483 aaKnown RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 ATPIF1Q9UII2 106 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 CDKN1CP49918 316 aaPredicted RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 DHX9Q08211 1270 aaKnown RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 ERFEQ4G0M1 354 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 DUPD1Q68J44 220 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 TRIM68Q6AZZ1 485 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 ZNF600Q6ZNG1 722 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 SCFD1Q8WVM8 642 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 TRMT2BQ96GJ1 504 aaKnown RBP15.94■□□□□ 0.14
PMPCB-201ENST00000249269 KCNQ5Q9NR82 932 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 COL4A1P02462 1669 aa15.94■□□□□ 0.14
PMPCB-201ENST00000249269 CYP3A7-CYP3A51PA0A087WV96 503 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 PNMA6FA0A0J9YX94 578 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 SYNDIG1LA6NDD5 238 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 MIF4GDA9UHW6 222 aaKnown RBP15.93■□□□□ 0.14
PMPCB-201ENST00000249269 MCF2LO15068 1137 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 RASGRP1O95267 797 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 S100A6P06703 90 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 CYP3A7P24462 503 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 NAT8LQ8N9F0 302 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 GDAP1Q8TB36 358 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 RFFLQ8WZ73 363 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 RELTQ969Z4 430 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 CNDP1Q96KN2 507 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 MBOAT7Q96N66 472 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 ERP44Q9BS26 406 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 SAMD15Q9P1V8 674 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 EDARQ9UNE0 448 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 TMEM247A6NEH6 219 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 RNGTTO60942 597 aaKnown RBP15.93■□□□□ 0.14
PMPCB-201ENST00000249269 SCGB1D2O95969 90 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 PLA2G4BP0C869 781 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 TROVE2P10155 538 aaKnown RBP eCLIP15.93■□□□□ 0.14
PMPCB-201ENST00000249269 XRCC5P13010 732 aaKnown RBP15.93■□□□□ 0.14
PMPCB-201ENST00000249269 FUT4P22083 530 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 CHKAP35790 457 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 STAT1P42224 750 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 CDK8P49336 464 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 TLDC1Q6P9B6 456 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 PIGSQ96S52 555 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 MKNK1Q9BUB5 465 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 EBF2Q9HAK2 575 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 HOMER2Q9NSB8 354 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 SAGE1Q9NXZ1 904 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 SNCAIPQ9Y6H5 919 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 PFASO15067 1338 aa15.93■□□□□ 0.14
PMPCB-201ENST00000249269 STK25O00506 426 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 DAPK3O43293 454 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 SLC37A4O43826 429 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 GRK2P25098 689 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 PON1P27169 355 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ETFBP38117 255 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 PDE6CP51160 858 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 PLTPP55058 493 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 DSTNP60981 165 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 RELQ04864 619 aaPredicted RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 NFIAQ12857 509 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 SMAD4Q13485 552 aaKnown RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 CUL3Q13618 768 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 EPHA7Q15375 998 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 PRPF38BQ5VTL8 546 aaKnown RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 MFSD5Q6N075 450 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 EPM2AIP1Q7L775 607 aaPredicted RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 FAM170AA1A519 330 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ENPP3O14638 875 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ACSL4O60488 711 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ADAMTS4O75173 837 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 OLFM2O95897 454 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 TNFAIP8L3Q5GJ75 292 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 HERC4Q5GLZ8 1057 aaPredicted RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 JAMLQ86YT9 394 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 SLC30A5Q8TAD4 765 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 SH3RF3Q8TEJ3 882 aaPredicted RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ZFAND2BQ8WV99 257 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 DYNLL2Q96FJ2 89 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 PACSIN1Q9BY11 444 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 CENPHQ9H3R5 247 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 CLK4Q9HAZ1 481 aaKnown RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 ZDHHC18Q9NUE0 388 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 BTG4Q9NY30 223 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 MTRF1LQ9UGC7 380 aaKnown RBP15.92■□□□□ 0.14
PMPCB-201ENST00000249269 GMEB1Q9Y692 573 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 MYH7BA7E2Y1 1941 aa15.92■□□□□ 0.14
PMPCB-201ENST00000249269 GPR75-ASB3A0A0A6YYF3 556 aa15.91■□□□□ 0.14
PMPCB-201ENST00000249269 O00370 1275 aa15.91■□□□□ 0.14
PMPCB-201ENST00000249269 SCAMP3O14828 347 aaKnown RBP15.91■□□□□ 0.14
PMPCB-201ENST00000249269 ALADP13716 330 aa15.91■□□□□ 0.14
PMPCB-201ENST00000249269 NR2F2P24468 414 aa15.91■□□□□ 0.14
PMPCB-201ENST00000249269 CHRNA3P32297 505 aa15.91■□□□□ 0.14
PMPCB-201ENST00000249269 ELF3P78545 371 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms